Halomonas sp. SF2003: C8233_05255
Help
Entry
C8233_05255 CDS
T05423
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
haf
Halomonas sp. SF2003
Pathway
haf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C8233_05255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_05255
Transporters [BR:
haf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C8233_05255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
B12D
Motif
Other DBs
NCBI-ProteinID:
AVV33158
LinkDB
All DBs
Position
complement(1310223..1311524)
Genome browser
AA seq
433 aa
AA seq
DB search
MSDSSAPATSGSAAHDPNGAPGAALTTADGVPLKQSLNRAIRRSRIKALLLVAPLLVFIG
LAFVMPIFDMLSRSVDNPEVSTYLPRTSEVLVDWDGEGLPEEAAYAALAQDLAAGLKARN
LGRVASRLNYEKSGMRSLFMKSARRAGRMEAPYKAALIKADEDWEDPDIWRLIKRESSPL
TASYYLAAVDRQFSPTGEIVEKPEYLQIHVSLFIRTFWMSAAITGLCLLLAYPVAWLLAT
LPASRGNLLMILVLLPFWTSLLVRTTTWIAILQQQGVLNDMLVGVGILAEEARIQMIYNK
TGTIIAMTHILLPFMILPLYSVMKTIPPSYMHAARSLGAGPITAFRRVYFPQTLPGIGAG
SILVFILSIGYYITPALVGGQSGRFITNFIAYHMQTSLNWGLAAAIGSILLVVVILFYLV
YNRLIGVDKVKLG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcctccgccccggccacgtccggaagcgcagcacatgaccccaatggtgcc
cccggcgcggcgctgaccaccgccgatggcgtaccgctgaaacagagcctcaatcgcgcc
atccgtcgcagccgcatcaaggcgttgctgctggtggcgccattgctggtcttcatcggg
ctggcattcgtcatgcccatcttcgacatgctgtcacgcagtgtcgacaacccggaagtc
tccacctatctgccacgcaccagcgaggtgctggtcgactgggacggcgaagggttgccg
gaagaggccgcctacgccgccctggcgcaggacctggccgcgggactcaaggcgcgcaat
ctcgggcgcgtcgcctcgcgtctcaactacgaaaagtccggcatgcggtcgctgttcatg
aagagcgcccgccgtgccggtcgcatggaggccccttacaaggccgcgctgatcaaggcc
gatgaggattgggaggacccggatatctggcgtctgatcaaacgcgaatcatcgcctctc
accgcttcctactatctggcggcggtggatcgccagttctcaccgacaggcgagatcgtc
gagaaaccggagtatctgcagatccacgtctcgctgttcattcgcaccttctggatgagc
gcggcgatcaccgggctgtgtctgttgctggcctatccggtggcctggctgctggcgacc
ctgccggccagtcgcggcaatctgctgatgattctggtgctgctgccgttctggacctcg
ctgctggtgcgaactaccacatggatcgcgatcctgcagcagcagggggtgctcaatgac
atgctggtgggcgtcgggatactcgccgaggaggcgcgtatccagatgatctacaacaag
accggcaccatcatcgcgatgacccacatcctgctaccgttcatgatcctgccgctgtac
tcggtgatgaagaccatcccgcccagctacatgcacgcggcgcgctcgctgggcgccggg
ccgatcaccgccttccggcgcgtctacttcccgcagaccctgccgggcatcggggcgggc
tcgattctggtcttcatcctctccatcggctactacatcacgccggcactggtgggcggg
cagtcgggccgcttcatcaccaacttcatcgcctatcacatgcagacctcgctcaactgg
gggctggcagcggccattggctcgatactgctggtcgtggtgatcctcttctatctcgtc
tacaaccgtctgatcggtgtggacaaggtcaaactggggtga
DBGET
integrated database retrieval system
