Halomonas sp. SF2003: C8233_06940
Help
Entry
C8233_06940 CDS
T05423
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00550
Peptidoglycan biosynthesis
haf01100
Metabolic pathways
haf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C8233_06940 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C8233_06940 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
haf01011
]
C8233_06940 (mrdA)
Enzymes [BR:
haf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C8233_06940 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
haf01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C8233_06940 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AVV33453
LinkDB
All DBs
Position
complement(1705737..1707683)
Genome browser
AA seq
648 aa
AA seq
DB search
MRQRRATIKNPQQEVRIFRLRSIVAAGLVLVLAGCLLARLLFLQVVEHDIYTTRSDKNRV
RVEPLPPTRGLIYDRNGQLLAENRPNYNLTIVRERAGDLETTLERLVEILDLPPDEVEDF
KERSRQRQRPYQPALLMSELSQEQIARLAVNRYRLPGVEVEAQLLRYYPDAKPLSHTLGY
VGRINQAELKTLDKGNYSGTHFIGKTGIERFYEEELHGQAGLRKVETNARGRVLRELSRI
DPVPGKDLTLTIDRGLQDLAYRLLKGRRGAIVAIEPETGDILAMASVPGFNSNEFVTGIS
VKSYRALQNDIDLPLFNRAIRGQYPPASTVKPFMSLAGLENGAITTSTTFYDPGYFQLPN
DSHKYRNWLRWGHGRVNMRRGIAVSNDTFFYNVAYRLGIDRISEYMHKFGFGEQTALDVQ
GALPGLMPSKEWKRNRYDKPWYPGETISIGIGQGYWLATPLQLASAEAVLANRGRHVTPH
LAKRIGDETVLLPRSEEKPDVVLDNPAWWDDVIAALEDVVSGREGTARKYVGPGLKYRMA
GKSGTAQVFTLGQDQKYNGKELAERLRDHALFAAFAPVEHPEIAVSVVIENGQGGSSVAG
PMARAVTDYWLLPRIDPEAREAALTLAAALAPPEAPAGEGEQGENDAD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaacgccgggcgacgataaagaatcctcaacaggaagtgcggatctttcgcctt
cgcagcatcgtggctgctggccttgtgctggtgctggccgggtgtctgctggcgcggctg
ctcttcctgcaggtcgtggaacacgacatctatacgacgcgctcggacaagaaccgtgtg
cgtgtcgagcccttgccgcccacgcgcggcttgatctatgaccgcaatggtcagctgctc
gccgaaaaccgccccaactacaatctcaccatcgtgcgcgaacgcgccggtgatctcgag
acgacgcttgagcgcctggtcgagattctcgatctgccgcccgatgaagttgaagacttc
aaggaacgctcgcgtcagcgtcaacgcccctatcagcccgccctgttgatgagtgaattg
agtcaggagcagatcgcgcgtctggccgtcaatcgctatcgcctgcccggcgtcgaggtc
gaggcgcagctgctgcgctactacccggacgccaagccgctgtcgcataccctggggtac
gtggggcgcatcaatcaggccgagctcaagaccctcgacaagggcaactattcgggcacc
cacttcatcggcaagaccggtatcgagcgcttctatgaagaggagctgcacggtcaggcg
ggcctgcgcaaggtggaaaccaatgcgcggggccgcgtgctgcgtgagctgtcgcggatc
gatccggtgccgggcaaggacctgacgctgaccatcgaccgcggcctgcaggatctcgcc
tatcggctgctcaaggggcggcgtggtgccatcgtggccatcgagccagagacgggcgac
atcctggcgatggcctccgtgccgggcttcaattccaatgaattcgtcaccggcatcagc
gtcaagagctatcgcgcgctgcagaatgatatcgacctgccgctgttcaatcgtgccatt
cgcggccagtacccgccggcctcgaccgtgaagcccttcatgtcgctggcggggctggag
aacggtgccatcaccaccagcaccaccttctacgaccccggctatttccagctgcccaat
gacagccacaagtatcgcaactggctgcgctgggggcatgggcgcgtcaacatgcggcgt
ggcattgcggtgtccaatgacaccttcttctacaacgtcgcctatcgcctggggatcgac
cgcatcagcgagtacatgcacaagttcggcttcggtgagcagacggcgctggacgtgcag
ggcgcgctgcccggcctgatgccgtccaaggagtggaagcgcaatcgctacgacaagccc
tggtaccccggcgagaccatctccatcggtatcggtcagggctactggcttgccacgccg
ttgcagctcgcctcggcggaggccgtgctggccaatcgcggcaggcacgtgacgcctcac
ctggccaagcgcatcggtgacgagacggtattgttgcccagaagcgaggaaaagccggat
gtggtgctggacaatccggcgtggtgggacgatgtcatcgccgcgctcgaggatgtggtc
agcgggcgagaaggcacggcgcgcaagtatgtcgggcccggcctcaagtaccgcatggcc
ggcaagtccggtaccgcgcaggtcttcaccctcggacaggaccagaaatacaacggcaag
gagctcgcggagcgtctgcgtgaccacgccctgttcgccgcctttgcgccggtcgagcac
ccggagattgccgtctccgtggtgatcgagaacggccagggcggcagctccgtggcgggc
ccgatggcgcgcgccgtcaccgattactggctgttgccgcgcattgaccccgaggcgcgt
gaggcggcgctcacgctggctgccgctctggcaccgccggaggcaccggcgggcgagggt
gagcaaggagagaacgatgccgactga
DBGET
integrated database retrieval system
