Halomonas sp. SF2003: C8233_07330
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Entry
C8233_07330 CDS
T05423
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haf03000
]
C8233_07330
Transcription factors [BR:
haf03000
]
Prokaryotic type
Helix-turn-helix
Other families
C8233_07330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_29
HTH_23
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AVV33521
LinkDB
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Position
1797405..1798262
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AA seq
285 aa
AA seq
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MAVHDLINRIRERLDELNRSERKVADVILADPAAATGMSIAALAQASLVSEPTVNRFCRN
FDAKGFPDFKIKLAQSLAGGTPYVSRSVDQNDDAAAYGDKILGATVAALDDARRALDPRR
IERAVDYLSQAKQICFFGLGASGPVAADAQHKFFRFNLPVMAYEDVLMQRMVAAACHTGD
VIVIISYTGRTRELVDIAKLARSNGAAVLGITAPDSPLARECTEVLEVMAPEDTDIYMPM
TSRMIHLALIDVLATGVTLRRGEDFQQHLKKIKDSLKDTRFPPES
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacacgacctcatcaatcgcatccgtgaacgtctcgacgagctcaatcgctcc
gagcgcaaggtcgccgacgtcattctggcggacccggctgcggccaccggcatgagcatc
gcggcgctcgctcaggcctcgctggtcagcgagccgaccgtcaaccgcttctgtcgcaac
ttcgatgccaagggcttccccgacttcaagatcaagctggcccagagcctggccggcggc
acgccctacgtgtcacgcagtgtcgatcagaacgatgatgccgccgcctatggcgacaag
attctcggtgccaccgtggccgcgctcgacgatgcccgtcgcgcactggaccccagacgc
atcgagcgcgccgtcgactacctgagccaggccaagcagatctgcttcttcggccttggc
gcctcaggcccggtcgcggcggatgcccagcacaagttcttccgcttcaacctgccggtc
atggcctatgaagatgtgctcatgcagcgcatggtggccgccgcctgccataccggcgac
gtgatcgtcatcatctcctacaccgggcgcacccgcgagctggtcgatatcgccaagctc
gcacgcagcaatggcgccgcggtactgggcatcaccgcaccggactctccgctggcgcgc
gagtgcaccgaagtgctggaagtcatggcgccggaagacaccgatatctatatgccgatg
acctcacgcatgatccacctggccctgatcgacgtgctggccaccggcgtgacgctgcgc
cgcggagaagacttccagcagcatctcaagaagatcaaggacagcttgaaggacacccgt
ttcccaccggagtcttga
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