Halomonas sp. SF2003: C8233_07665
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Entry
C8233_07665 CDS
T05423
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haf03019
]
C8233_07665
Messenger RNA biogenesis [BR:
haf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C8233_07665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
AAA_22
AAA_18
SKI
DUF7001
AAA_21
mTERF
CoaE
Apolipo_F
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVV33574
LinkDB
All DBs
Position
1866473..1867408
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AA seq
311 aa
AA seq
DB search
MKIVIISGRSGSGKSIALQALEDIGYYAIDNLPGMLLAPLVDQLEKDSPARRRIAVSIDA
RNLPEALTRFPELLDNVRQSGMDVQVVYLTTDSRVLLERYSATRRRHPLTRDNDHTLAEA
IEIEQKTLAPIRQKADLVIDSTNLSVHDLRSRITEQVAQHSSRHLTLTFESFGFKHGVPT
DADMVFDARCLPNPYWDINLRGDTGRDDSVAEFLQRYPTVQAMHDDIAGWLERWLPAYQD
SNRSYLTVSVGCTGGQHRSVYLCEQLASYFAERLPEVRLRHRELGIHTALSNAGEASDQQ
EHQQEHRDGLS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtgatcatcagcggccgctccggctccgggaaatccatcgctctccaggcg
ctggaagatattggctactacgccatcgacaatctgcccggcatgctgctggcgccactg
gtcgatcagctcgaaaaggacagcccggcgcgccggcgcatcgcggtctccatcgatgcc
cgcaacctgccggaagccttgacccgcttccccgaattgctcgacaacgtccgccagagc
ggcatggacgtgcaggtcgtctacctgaccaccgattcgcgagtgctgctggaacgctac
tcggcgacccgtcgtcgtcaccctctgacgcgcgacaatgaccacaccctggccgaggcc
atcgagatcgagcagaagacgctcgctcccatccgccagaaggccgatctggtcatcgac
tcgaccaacctgagcgtgcatgacctgcgctcgcgcatcaccgagcaggtcgcccagcac
agctcccgccacctgacgctgacctttgaatccttcggcttcaagcatggcgtgccgacc
gacgccgacatggtgttcgatgcccgctgcctgcccaacccgtactgggacatcaatctg
cgcggtgataccggtcgcgatgacagcgtggccgaattcctgcagcgctaccccaccgtc
caggcgatgcatgacgatatcgccggctggttggaacgctggctgcccgcgtatcaggac
agcaaccgcagctacctgacggtgtccgtaggctgcaccggcggccagcatcgcagcgtc
tacctgtgcgagcagctggcaagttacttcgccgagcgcctgcctgaggtgcgcctgcgt
caccgcgagctgggcattcataccgcgctgagcaacgcgggtgaggcgagtgatcagcaa
gagcatcagcaggagcatcgcgatggcctctcgtga
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