Halomonas sp. SF2003: C8233_08125
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Entry
C8233_08125 CDS
T05423
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00071
Fatty acid degradation
haf00280
Valine, leucine and isoleucine degradation
haf00310
Lysine degradation
haf00362
Benzoate degradation
haf00380
Tryptophan metabolism
haf00410
beta-Alanine metabolism
haf00640
Propanoate metabolism
haf00650
Butanoate metabolism
haf00907
Pinene, camphor and geraniol degradation
haf00930
Caprolactam degradation
haf01100
Metabolic pathways
haf01110
Biosynthesis of secondary metabolites
haf01120
Microbial metabolism in diverse environments
haf01200
Carbon metabolism
haf01212
Fatty acid metabolism
Module
haf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C8233_08125
00650 Butanoate metabolism
C8233_08125
09103 Lipid metabolism
00071 Fatty acid degradation
C8233_08125
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C8233_08125
00310 Lysine degradation
C8233_08125
00380 Tryptophan metabolism
C8233_08125
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C8233_08125
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C8233_08125
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C8233_08125
00930 Caprolactam degradation
C8233_08125
Enzymes [BR:
haf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C8233_08125
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C8233_08125
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C8233_08125
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C8233_08125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
AVV33648
LinkDB
All DBs
Position
complement(1974044..1976194)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYSGKTLTVEANQDAIALLTLDLEGESVNKLASYVLKELGEAVEAIKATADLKGLVIRS
AKEAFVVGADITEFHQMFEKDEAFLIDMNMNIHGIFNAIEDLPFPTVTAINGLALGGGCE
ITLTTDFRVMADSAKIGLPETKLGIIPGWAGCVRLPRLIGADNAIEWICGGTENRADKAL
AVGAVDAVLPVAELDAAALDILARANAGELDYQARRLEKTSPLKLNAIEQMMAFETAKGF
VAGKAGPHYPAPVEAIKVIQKGAGESRERAQAIEAKTFARMALTDVAFNLVGLFMNDQVV
KKKAKGYEKQASEIKQAAVLGAGIMGGGIAYQSASKGTPILMKDINGEAIELGLKEARKL
FGKGVERGKLTTEKMAQGLSNIRPTLSYGDFGNVDLVVEAVVENPKVKASVLAELEDNVA
EDAILTSNTSTISITRLAESLKRPENFCGMHFFNPVHRMPLVEVIRGEKSSDAAIAATVA
YARQMGKTPIVVNDCPGFLVNRVLFPYFGGFSLLVEKGADYQRVDKVMEKFGWPMGPAYL
LDVVGMDTAVHANAVMAEGFPDRMARDGKTAIQVMYDNKRLGQKNDLGFYRYEEDRKGKP
KKLADDEAQALVAQVVSETREFSDEDIIARMMVPLCMETIRCLEDDIVGSPAEADMALIY
GIGFPPFRGGALRYVDAMGVAEFVALADSLADELGPLYRPTEALRERAKRGDAFYS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctattcaggcaaaacgctaaccgtcgaggccaatcaggacgccatcgccctgttg
accctcgatcttgaaggcgaatcggtcaacaagctggccagctacgtactcaaggagctg
ggagaggcggtcgaggccatcaaggcgacggccgatctcaaggggctggtcatccgctcc
gccaaggaagcgttcgtggtcggagccgatatcaccgagttccatcagatgttcgagaag
gatgaagccttcctcatcgacatgaacatgaacatccatggcatcttcaatgccatcgag
gacctgccgttccccaccgtcactgccatcaatgggctggcgctgggcggtggctgcgag
atcaccctgaccaccgatttccgggtcatggccgacagcgccaagatcggcctgccggaa
accaagctcggtatcatccccggctgggcgggctgtgtacgactgccgcgcctgatcggg
gcggacaacgccatcgagtggatctgtggtggcaccgagaaccgtgccgacaaggcgctg
gcagtgggcgccgtcgatgccgtcctgcccgtggccgagctggacgcggcggcactcgat
attctggcgcgtgccaatgccggcgagctggactatcaggcgcgtcgtctcgagaagacc
tcgccactcaagctcaatgccatcgagcagatgatggccttcgagaccgccaagggcttc
gtggccggcaaggccggtccgcactatccggcgccggtggaggccatcaaggtcatccag
aagggcgcgggggaatcgcgtgagcgtgcccaggccatcgaggccaagaccttcgccagg
atggcgctgaccgacgtggccttcaatctggtcggcctgttcatgaacgatcaggtggtc
aagaagaaggccaagggttacgagaagcaggccagcgagatcaagcaggccgccgtgctg
ggggccggcatcatgggcggcggcatcgcctatcagagcgccagcaagggcacgccgatc
ctgatgaaggacatcaacggcgaggccatcgaactgggcctcaaggaggctcgcaagctg
ttcggcaagggcgtcgagcgcggcaagctgaccaccgagaagatggcgcagggcctgtcc
aacattcgcccgacgctgtcctacggtgacttcggcaatgtggacctggtcgtcgaggcg
gtggtcgagaatcccaaggtcaaggcctctgtgctggccgagctcgaggacaacgtcgcc
gaggacgccatcctgacctccaacacctcgaccatctccatcacgcggctggccgagtcg
ctcaagcgtcccgagaacttctgcggcatgcacttcttcaacccggtgcaccgcatgccg
ctggtcgaggtcatccgtggcgagaagtccagcgatgcggccatcgccgcgaccgtcgcc
tatgcccgccagatgggcaagacgccgatcgtcgtcaacgactgcccgggctttctggtc
aaccgcgtgctgttcccctacttcggtggcttcagcctgctggtcgagaagggcgccgac
tatcaacgcgtcgacaaggtgatggagaagttcggctggccgatgggtccggcctacctg
ctggatgtggtcggcatggataccgcggtgcacgccaatgccgtgatggcggaaggcttc
ccggaccgcatggcgcgagacggcaagaccgccatccaggtgatgtacgacaacaagcgc
ctcggccagaagaacgatctgggcttctaccgctacgaggaagaccgcaagggcaagccg
aagaagctggcggatgatgaggctcaagcgctggtggcacaggtcgtcagcgagacgcgc
gagttctccgatgaagacatcatcgcgcgcatgatggtgccgctgtgcatggaaaccatc
cgctgcctggaagacgacatcgtcggcagcccggccgaggccgacatggccttgatctac
ggcatcggtttcccgccgttccgtggtggcgcgctgcgctatgtagatgccatgggcgtg
gccgagttcgtcgcgctggccgacagcctggccgatgagctggggccgctgtatcgcccg
accgaggcgctgcgcgagcgcgccaagcgtggcgacgccttctactcctga
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