Halomonas sp. SF2003: C8233_08725
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Entry
C8233_08725 CDS
T05423
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_08725
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C8233_08725
Archaeal homologous recombinant proteins
C8233_08725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AVV33745
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All DBs
Position
2137852..2139270
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AA seq
472 aa
AA seq
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MSFRFLHTSDWHLGQSFHGQSRHVEHAAFLDWLLGQLKTLAPDALLIAGDLFDVVNPSLA
AQELLYDFIVRAHEQDAALEIVMIAGNHDSGSRIELPAALLARLKTHALGRVRWVDDSAD
GGDAHSLDCQHLLVPLHDRDGKRRALCLAVPFLRPAEVTGLSSGEQAEQEGEAAGKAERT
RSEAYRDGVARVHQQLVSAARAARQPGEALIAMGHAHMRDGEVSENSERPILMGGEEALS
TSLFPDDIAYVALGHLHRPQRVGGEERIRYCGTPLAMDFSEVDYGHRILDVTLNNESLEK
VTEHRVPCHVALTRVGPAPLAEITTQLTALVAEAQADLEPTRWPWLEVTVQLEAPLIDLR
ARIEALLEGAPLRLIKLVTRYPAPSAEHRAPKGVKLDELGPMGLFERHYRATYDSEPDPT
LIEDFAQLLEEVEAARETRLEGEPATRPARKADKAASIDKKASADKAKGGQA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttccgctttctgcacacttccgactggcatctcggccagagctttcacggccag
agccgtcacgtcgagcatgctgcctttctcgactggctgctcgggcagctcaagactctg
gcgccggatgcgctgctgatcgccggagacctgttcgatgtggtcaacccgagcctggcc
gcccaggagctgctctacgacttcatcgtgcgcgcccacgagcaggacgcggcgctggag
atcgtgatgatcgccggcaatcacgattccggctcgcgcatcgagctgccggccgcgttg
ttggcacgtctcaagacccatgcgctgggtcgcgtgcgctgggtggatgactccgccgac
ggcggcgatgcccacagtctcgactgccagcatctgctggtgcccctgcatgatcgtgac
ggcaagcgccgcgccctgtgcctggcggtgcccttcctgcgcccggccgaggtcaccggc
ctgagcagcggcgagcaagccgagcaggaaggagaagcagcaggcaaggccgaacgcacc
cgcagcgaggcctaccgcgacggcgtggcccgcgtgcaccagcagctggtcagtgctgcg
cgcgccgcccgccagcccggcgaggcgctgatcgccatgggccatgcccatatgcgtgac
ggcgaggtgtccgagaacagcgagcgcccgatcctgatgggtggcgaagaggcgctctcg
accagcctgttccccgacgacatcgcctatgtggcgctgggccacctgcatcgcccgcaa
cgcgtgggtggcgaggagcgcatccgctattgcggtacgccgctggcgatggacttctcc
gaggtcgactacggtcaccgcatcctcgatgtcacgctcaacaatgaaagcctggagaag
gtcacggagcatcgcgtgccctgccatgtcgcgctcacgcgcgtcgggcctgcgcccctg
gccgagatcaccactcaactcacggcgctggtcgccgaagcgcaggcggatctcgagccg
acacgctggccgtggctggaagtgaccgtgcagctggaagccccgctgatcgacctgcgc
gcccgtatcgaggcactgctggaaggcgcgccgctgcgtctgatcaagctggtcacccgc
tacccggcgcccagtgccgagcatcgcgcgccgaagggcgtgaagctcgatgagctgggc
ccgatggggctgttcgagcgccactatcgcgccacctatgacagtgagccggacccgacg
ctgatcgaggatttcgcccagctgctcgaggaggtcgaggccgcgcgcgagacgcgtctc
gaaggcgagccggccacccgacccgctcgcaaggccgacaaggcggcttcgatagacaag
aaagcttcggcagacaaggccaagggaggtcaggcatga
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