Halomonas sp. SF2003: C8233_08930
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Entry
C8233_08930 CDS
T05423
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00630
Glyoxylate and dicarboxylate metabolism
haf00680
Methane metabolism
haf01100
Metabolic pathways
haf01120
Microbial metabolism in diverse environments
haf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C8233_08930
09102 Energy metabolism
00680 Methane metabolism
C8233_08930
Enzymes [BR:
haf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
C8233_08930
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_8
Fer4_21
Fer4_Nqo3
Fer4_9
Fer4_16
Fer4_10
Fer4_2
Fer4_6
Fer2
Fer4_15
Fer4_22
Fer4_17
Fer4_18
Fer4_4
LysM
SymE_toxin
Motif
Other DBs
NCBI-ProteinID:
AVV33778
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Position
complement(2194021..2197047)
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AA seq
1008 aa
AA seq
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MNALTGLGNSSSDDQPLREDGFTITLDGAEVTAYPGETLWKIAKRAGETIPHLCYSEAPD
YRGDGNCRACMVEIDGERTLAASCIREARAGMVVRSASSRRAGEARAMVVELLAADMPAE
AHNPDVSSHFMAMAELLAVDVGHARETLGGARETVREWLGETVEEWLPTQASALDHSHTA
MAVNHDACISCGLCVRACREVQVNDVIGLAGRGSNTRIVFDLEDPMGDSTCVACGECVQA
CPTGALMPAAQVDEQGFGDSAAVDERVASICPYCGVGCQLEYQVSRGSGEALSVEGQPVA
TLADAQQGMADGDSLKTDKRRQRVADTRLDNIIAVSGRDGPSNHGRLCVKGRFGFDYPRH
PERLIRPLIRRDGVAKGLDANFDPAHPLTHFREASWDEALEVAAEGLMRLKRSHGPDSLA
GFGSAKCTNEEAWLFQKLVRTGFGSNHVDHCTRLCHASSVAALMEGVGSGGVSASFMQAE
QSDLIVLTGCNPGVNHPVAATFFKRAAKRGTRIVVIDPRALALRRQAHRSIQFTPGADVA
LFNAMLNVIISEGLANQAYIEAHTEDFAALAEHVAALTPEAMSPLCGVAAEEIRAVAREY
ATARRAMIFWGMGISQHTHGTDNARCLIALALVCGHVGREGTGLHPLRGQNNVQGASDAG
MIPMVFPDYQPVGDTAARERLEALWQTPLSATPGLTVVEIMHAIHADQIRGMYILGENPA
MSDPDLEHARSALAHLEHLVVQDIFVTETAQFADVVLPSYAWPEKDGSVTNTNRQVQRGR
AALRAPGEARPDWWITQQLARRMGLDWDYAGPEEIYTEMQKGMDSLDNIDWARLSEENSV
TYPCLTPGGEGEDVVFGEGFPRASGRARFVPTWPTPPDETLDDDYPTVLTTGRQLEHWHT
GSMTRRAAVLDNLEPAAVATLNPVELERLGITPGEPLSITTRRGQITLATRADPLTPAGM
VFVPFCYAEAAANLLTNPALDPVGKIPEFKYAACRLARAEPASAGVES
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctgacaggattgggcaactcgtcctcggatgatcagccgctgcgcgaggat
ggcttcaccatcacgctggatggtgccgaggtgacggcctatcccggcgagacgctgtgg
aaaatcgccaagcgtgccggcgagacgattccccacctctgctacagcgaagcgcctgac
tatcgcggcgatggcaactgtcgcgcctgcatggtcgagatcgatggcgagcgcactctc
gccgccagctgcatccgcgaggcgcgagcgggcatggtggtgcgcagtgccagttcacgg
cgtgccggcgaggcgcgcgcgatggtggtggagctgctcgccgccgacatgcccgccgag
gcgcacaaccccgatgtcagcagccacttcatggcgatggccgagctgctggcggtggat
gtcgggcacgctcgcgagaccctgggcggcgcccgcgagacggtccgcgagtggctgggg
gagaccgtggaggagtggttgccgacgcaggccagcgctctcgatcactcccataccgcg
atggcggtcaatcatgacgcctgcatcagctgcggcctgtgcgtgcgcgcctgtcgcgag
gtacaggtcaatgacgtgatcgggctggcggggcgcggcagcaatacgcgcatcgtgttc
gatctcgaggacccgatgggcgacagcacctgcgtcgcctgtggcgagtgcgtgcaggcc
tgcccgaccggcgccctgatgcccgccgcccaggtggatgagcagggcttcggcgacagc
gccgccgtcgatgagcgcgtcgcctccatctgcccgtactgcggcgtgggctgtcagctg
gagtatcaggtcagtcgcggcagcggcgaggcattgagtgtcgagggtcagccggtcgcg
accctggcggatgcccagcagggcatggcggacggcgactccctcaagactgacaagcgc
cggcagcgcgtcgcggatacgcggctggacaacatcattgcggtcagtgggcgcgatggg
ccatccaaccacggtcggctgtgcgtgaagggacgcttcggcttcgattatccgcgtcat
ccggagcgtctgatccgtcccctgatccgccgtgacggtgtggccaaggggctggacgcg
aactttgaccccgcccacccgctgacccatttccgtgaggccagctgggacgaggccctc
gaggtcgcggccgaggggctcatgcgcctcaagcgctcgcatggccccgacagcctggcg
ggcttcggcagcgccaagtgcaccaacgaggaggcgtggctgttccagaagctggtgcgc
accggcttcggctccaaccatgtcgatcactgcacgcgcctgtgtcatgcaagttcggtg
gcggcgctgatggaaggcgtcggctcgggcggcgtgagtgcctccttcatgcaggccgag
caatccgatctgatcgtgctgaccggctgcaatccgggcgtcaatcatccggtggcggcg
accttcttcaagcgcgccgccaagcgtggcacgcgcatcgtggtgatcgacccgcgcgcg
ctggcgctgcgtcgtcaggcgcatcgctcgatccagttcacgccgggggcggacgtggcg
ctgttcaatgccatgctcaacgtcatcatcagcgaggggctggccaatcaggcctatatc
gaggcacacaccgaggacttcgccgcgctggcggagcatgtcgcggcgctgacgccggag
gcgatgtcgccgctgtgtggcgtggcggcagaagagattcgcgccgtggcccgcgagtat
gcgaccgccaggcgcgcgatgatcttctggggcatgggcatctcgcagcacacccacggc
accgacaatgcgcgctgcctgatcgcgctggcgctggtgtgtggtcacgtcgggcgtgaa
ggcaccggcctgcacccgctgcgcggtcagaacaatgtccagggtgcctcggatgccggg
atgattccgatggtgttccccgactatcagccggtgggtgacacggcggcgcgcgagcgg
ctggaagcgctgtggcagaccccgctctcggcgacgccgggcctgacggtggtggagatc
atgcacgccatccacgccgaccagatccgcggcatgtacattctcggcgagaatccggcg
atgtcggacccggatctcgaacatgcgcgcagcgcgctggcgcatctggaacacctggtg
gtgcaggacatcttcgtcaccgagacggcacagttcgccgatgtggtgctgccctcatac
gcctggccggagaaggacggcagcgtcactaataccaaccggcaggtgcagcgcgggcgg
gcggcactgcgcgccccgggcgaggccaggccggactggtggatcacccagcagctggcg
cggcgcatgggacttgactgggattacgccgggccggaggagatctacaccgagatgcaa
aagggcatggattccctcgacaacatcgactgggcgcggctgtccgaggagaactcggtg
acctatccgtgcctgacgccggggggcgagggcgaggatgtggtattcggcgagggcttc
ccgcgcgccagcggccgtgcccgcttcgtaccgacctggcccacgccgccggatgagacg
ctggatgatgactacccgacggtgttgaccaccggccgtcagctggagcactggcatacc
ggctcgatgacgcgccgcgcggcggtgctcgacaatctcgagccggccgccgtggccacg
ctcaatccggtggagctggagcgactgggcatcacgccgggcgagccgctctcgatcact
acgcgacgtggtcagatcaccctcgccacccgcgccgatccgctgacgccggccggcatg
gtcttcgtgccattctgctacgccgaagccgccgccaacttgctgaccaatccggcgctc
gacccggtgggcaagattcccgagttcaagtacgccgcctgtcgtctggccagagccgaa
cccgcctcggcgggtgtggagagctga
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