Halomonas sp. SF2003: C8233_08965
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Entry
C8233_08965 CDS
T05423
Name
(GenBank) (Fe-S)-binding protein
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
haf
Halomonas sp. SF2003
Pathway
haf00260
Glycine, serine and threonine metabolism
haf01100
Metabolic pathways
Module
haf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C8233_08965
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_9
Fer4_17
Fer4_10
Fer4_7
Fer4_16
Fer4_2
Fer4_6
Fer4
Fer4_18
Fer4_22
Fer4_4
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AVV33785
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Position
complement(2205091..2207301)
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AA seq
736 aa
AA seq
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MNDTILSVLIFTALALAAIGAVKRIGLWRQGRADATSMSMGELIASLAKVPRRYGVDLHH
VVARDRYMANTHVATGGGFVAAALLMVVVYGFGIDSAWLGVLLLLASGAMFGGALFVRRR
RLDPPARLSRGPWMRLPKSLLVFSASLFVMSLSLVLPEGVGGMISGGILGLVLVVGIAWG
LLEMIVGMTGGGSRITGPMKHAFAGALHLAFHRRPARFSTRDSAGIRDSALLPLDLTNPE
APLGVGKPSDFNWRQLLGFDACVQCGRCEAVCPAFAAGQPLNPKKLIQDMVVGMAGGSDA
AYAGSPYPGDEPRRAPGQHGGDPQQAIVGASPHARPAAQAVDSDSQTVASGPIQIKAAPG
AAGEATDGDKLIHEFKVLVEPETLWACTTCRACVEECPMMIEHVDAIVDMRRHMTLEQGA
TPGKGVEVLDNLIATDNPGGFALEARLHWAADLDLPRIAELQAAREAARDPRPVEALLWL
GDGAFDMRNQRTLRAFVQVLRAARVDFAILGAEERDSGDVARRLGDEATFQSLATRNIAT
LSKYRFARIITCDPHSFHVLGREYAAFGGDYLVNHHTSYMNELLAAGRLSLDATRLATLG
AVTWHDPCYLGRYNGEFEAPRTLLAALGLEVREMQRSGFRSRCCGGGGGAPVTDIPGKQR
IPDMRMGDVRETGAEVVAVGCPQCTAMLEGVVAPAGEAEPQVLDLAELMARALVLEASTQ
GLAASTTQPTDAEVAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacacgatcttgtcggtattgatcttcaccgcgctggcgctggctgcgatcggc
gcggtcaagcgcatcggcctgtggcgccaggggcgggcggacgccacgtccatgagcatg
ggagagctgatcgcgagccttgccaaggtgccgcgccgttacggggtggacctgcaccac
gtggtcgcgcgggaccgctatatggccaacacccacgtcgccaccgggggcggcttcgtg
gccgcggcgctgctgatggtggtggtctacggcttcggcatcgactccgcctggctgggc
gtcttgctgctgctggccagtggcgcgatgttcggtggcgcgctgttcgtgcgtcgtcgt
cgcctcgacccgccggcacgcctgtcgcgtggtccgtggatgcgtctgcccaagagcctg
ctggtgttctccgcaagcctgttcgtgatgagtctgtcactggtgctgccggaaggcgtc
ggcggcatgatctccggcggtatcctcgggctggtgctggtagtgggcatcgcctgggga
ctgctcgagatgatcgtcggcatgaccggcggcggctcgcgcatcaccgggccgatgaag
catgccttcgccggtgcgctgcatctggccttccatcggcgtccggcacgtttcagcact
cgtgacagtgcgggcatccgcgacagcgcattgctgccgctggacctgaccaaccccgag
gcaccgctgggtgtcggcaagccgtccgatttcaactggcgtcagctgctgggcttcgat
gcctgcgtgcagtgcgggcgctgtgaagcggtgtgcccggcgttcgcggccggtcagccg
ctcaatcccaagaaactgattcaggacatggtggttggcatggccggtggcagcgatgcc
gcctacgccggctcgccttatccgggcgatgagcccaggcgcgcgcccggccagcatggc
ggcgacccgcagcaggccatcgtcggggcctctccgcatgctcgcccagcagctcaggcc
gttgactctgatagccagaccgttgcctctggaccgatccagatcaaggcggcaccgggt
gctgcgggtgaggcgacagatggcgacaagctgatccacgaattcaaggtactggtcgag
ccggaaaccctgtgggcctgcaccacctgtcgcgcctgcgtcgaggagtgcccgatgatg
atcgagcacgtcgatgccatcgtcgacatgcgccgtcacatgacgctggaacagggcgcg
acgccgggcaagggtgtcgaggtgctcgacaacctgatcgccaccgacaacccgggcggc
ttcgcgctcgaagcgcgtctgcattgggcggcggatctcgacctgccgcgcatcgccgag
ctgcaggccgcccgcgaggcagcgcgtgatccgcgtccggtggaagcgctgctgtggctg
ggcgatggcgccttcgacatgcgcaaccagcgcacgctgcgcgccttcgtgcaggtgctg
cgcgccgccagggtcgatttcgccatcctcggtgcggaagaacgtgacagtggcgacgtg
gcgcgtcgtctgggggatgaggcgaccttccagtcgctggccacccgcaatatcgccacc
ctgtcgaagtatcgcttcgcgcgcatcatcacctgcgatccgcacagcttccatgtgctg
ggtcgtgaatatgccgccttcggtggcgactacctcgtcaaccaccacaccagctacatg
aacgagctgctggcggcgggtcgtctgagcctcgatgccaccagactggcgacgctcggc
gcggtcacctggcacgacccctgctatctgggtcgctacaacggtgaattcgaggcgccg
cgtaccttgctggcggcgctgggactggaagtgcgcgagatgcagcgctccggcttccgc
tcacgctgttgcggcggcggtggcggcgcgccggtgactgacatccccggcaagcagcgt
atccccgacatgcgcatgggcgatgtgcgcgagaccggcgccgaggtggtggcggttggc
tgcccgcagtgcaccgcgatgctggaaggcgtggtggctccggccggtgaagccgaaccc
caggtgctggatctggcggaactgatggcgcgggcgctggtactggaagcgtccacgcaa
ggcttggcggcgtcgaccacgcagcccactgacgcggaggtggcggcatga
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