Halomonas sp. SF2003: C8233_09505
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Entry
C8233_09505 CDS
T05423
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_09505
Enzymes [BR:
haf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
C8233_09505
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
C8233_09505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF6381
Motif
Other DBs
NCBI-ProteinID:
AVV35497
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Position
2334037..2335689
Genome browser
AA seq
550 aa
AA seq
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MATRHDFARPLVLILGDQLSHDLASLKQAPADSVIAFCEVEEEGRYVPHHPHKIAMMLAA
MRHHAQELRECGWQVHESRLEDPDNLQRLASEAERLAALYQCDGVLVTRPGEWRLLDDFL
ARREAGSVRWEVLEDTRFFTTPAAFAGWAEGRKQLRMEYFYRERRRDTDLLMEGSEPAGG
KFNHDHDNREPIPDDFHAPPPPVHAHHEDATTREVLALVAARFGEQASDKERHFGSLENF
NWAVTRAQARSDLAHFLDHCLADFGRYQDAIEDSDPFLFHSRLSAALNIGLLSPQEVCNA
VDAAWRRGEVPINSAEGFIRQILGWREYVRGIYWTRMPGYKRENRLEASRNLPEFFWTGD
SGMRCLDQAIASTREHAYAHHIRRLMVTGNFALLCGVKPEALCDWYLAVYVDACEWVELP
NTLGMVLHADGGLMGSKPYCASGKYIDRMSNHCASCQYSPKKVTGPQACPLNSLYWHFIE
RHREALSRNPRMSLVYGSWRRMKDDKRDALLQQADAFLARLDSAADYGSDAHRAGYYAAP
SSLTPDKESS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ctggcgacgcgtcatgacttcgcgcggccactggtgctgatcctcggcgaccagcttagc
catgacctggcaagcctcaagcaggcacccgccgacagcgtgatcgccttctgcgaggtc
gaggaggaaggccgctacgtgccgcaccacccgcacaagatcgcgatgatgctggccgcg
atgcgccaccacgcccaggaactcagggagtgtggctggcaggtacatgaaagccgactg
gaggacccggacaacctccagcgtctggccagcgaggcagagcgtctggccgccctgtat
cagtgtgatggcgtgctggtgacccgccccggcgagtggcgtctgctggacgactttctg
gcgcggcgcgaggccggcagcgtgcgttgggaagtcctcgaggacacacgcttcttcacc
acgccggcagccttcgccggctgggccgagggccgcaagcaactgcgcatggagtacttc
tatcgcgagcgacgccgtgacacggacctgctgatggaaggcagcgaacccgccggcggc
aagttcaaccacgaccacgacaaccgcgaaccgattccagacgacttccacgccccaccg
ccgccggtgcatgcccatcacgaagatgcgacgacccgcgaggtactggcgctggtcgcg
gcgcgcttcggggagcaggccagtgacaaggaacgccacttcggcagcctcgagaacttc
aactgggccgtcacgcgcgcccaggcccgctctgacctcgcgcattttctcgatcattgc
ctggcggacttcggccgctatcaggatgccatcgaggacagcgacccgttcctgttccat
tcacgcctgtctgccgcgctcaatatcggcctcttgagcccgcaggaggtctgcaacgcc
gtggacgccgcctggcggcgcggtgaggtgccgatcaactcggcggaggggttcattcgc
cagatactcggctggcgcgaatatgtgcgcggcatctactggacgcgcatgcccggctac
aagcgcgagaaccggctggaagccagccgcaacctgccggaattcttctggacgggggac
agcggcatgcgctgtctggatcaggccatcgccagcacccgcgagcatgcctacgcccac
catattcgccgcctgatggtcacaggcaacttcgcgctgctgtgcggcgtgaagcccgag
gcgctatgcgactggtatctggcggtctatgtggacgcctgtgaatgggtcgagctgccc
aatacgctgggcatggtgctgcatgccgatggcggcctgatgggctccaagccctactgt
gcctcgggcaagtacatcgaccgcatgtccaatcactgcgccagctgccagtactcgccg
aagaaggtcaccggccctcaagcctgcccgctcaacagtctctactggcacttcatcgag
cgccatcgcgaggcgttgtcacgcaatccgcgcatgtcactggtctacggcagctggcga
cgcatgaaggacgacaagcgcgacgccctgctgcaacaggccgacgccttcctggctcgc
ctcgacagcgccgcggactatggcagtgatgcccatcgcgccggttactacgccgcaccc
tccagtctcacgcccgacaaggaatcctcatga
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