Halomonas sp. SF2003: C8233_10100
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Entry
C8233_10100 CDS
T05423
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
haf
Halomonas sp. SF2003
Pathway
haf02020
Two-component system
haf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C8233_10100
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C8233_10100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
haf02022
]
C8233_10100
Two-component system [BR:
haf02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
C8233_10100
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
AAA_16
AAA
UreE_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVV33955
LinkDB
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Position
2464430..2465707
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AA seq
425 aa
AA seq
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MIISHKSLTSIWVLDKPPRRTLNAGESRLSGEAVTRSSPTIILSQPARTKRRQCRKTSSK
GTTLMTALKAHQAASSATALNLADDISTTSRVRELPVKRPRGFGEFIGDSSAMQTLYRTL
IQVAHSDAPIFITGESGSGKELCATAIHRHSPVRDGPFIAVNCAAIPAELLESQLFGHVR
GAFTGAVSAQQGLAVAADGGTLFLDEIAELPLPLQSKLLRFLQTGQVMPVGATRTVEVNC
RIVCATHQNPRVLVDTHRFREDLFYRLHVIPLKVPPLRERGQDILEIATGLLGRMAGHEG
KRFTRLSACAERQLLAHDWPGNVRELENTLRRAIILNDGEVLTADMLDLPSSTAHRTSVS
HNAQKDSETTLRPLWMVEREAIESVISACDGSIPRAAAILEIAPSTIYRKRLSWLAMHPD
EPTSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatcatctcgcacaagtcattaacctctatatgggtactcgataaaccaccaagacga
acactcaacgctggagaatccagactctccggtgaggctgtcaccagaagcagcccgaca
attattctttcgcagcccgctcgcacgaagcgcaggcaatgcagaaagaccagcagcaag
ggaacaacactcatgaccgcactgaaagctcatcaggctgcatcatcggctactgcattg
aatctggctgacgatatctccactacctcgcgggtaagggaactaccggtaaagcgacct
cgcggttttggggagtttatcggagactcatcggccatgcagacgctctatcgcactctc
atccaggtcgcccactcggacgctcccatcttcatcaccggcgaaagcggcagcggcaag
gaattgtgtgccactgccattcaccgccatagcccggtacgtgacggcccgttcatcgcc
gtcaattgtgccgccattccggcagagttgctggagtcgcaattgttcggacatgtgcgc
ggggctttcacgggggccgtgagcgcccagcaggggctcgccgtggcggcagatgggggg
acgctgtttctcgatgagatcgcggagcttccgctgcccttgcagagcaagctgctgcgc
ttcctgcagacaggacaggtaatgccggtgggcgccacgcgcacggtagaggtcaattgc
cgcatcgtgtgcgccacgcatcagaacccgcgggtactggtcgatactcaccgcttccgg
gaagacctcttctatcgtctgcacgtcatcccgctcaaggtgccgccgctgcgcgaacgc
ggtcaggatatcctggagatcgccaccgggctgttggggcgcatggcaggccacgaaggc
aagcgcttcacacgactcagtgcgtgcgccgagcgtcagctgctggcccatgactggccc
ggcaatgtgcgggagctggaaaacacgctgcggcgcgccatcatcctcaatgatggtgag
gtgctgacggccgacatgctggacctgccttccagcacggcgcatcgcacgtcagtcagc
cacaacgcgcagaaggacagcgagaccacgttgcgcccgctgtggatggtcgaacgcgag
gcgatcgagagcgtcatcagcgcctgtgatggcagtatcccccgcgctgcggcgatactg
gagatcgccccctctaccatctatcgcaagcgcctgagctggctggcgatgcacccggac
gagcccacctcgcactga
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