Halomonas sp. SF2003: C8233_10135
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Entry
C8233_10135 CDS
T05423
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C8233_10135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_10135
Enzymes [BR:
haf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
C8233_10135
DNA repair and recombination proteins [BR:
haf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C8233_10135
Prokaryotic type
C8233_10135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
Virulence_fact
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AVV33957
LinkDB
All DBs
Position
complement(2466905..2468077)
Genome browser
AA seq
390 aa
AA seq
DB search
MARPDIAATPDVTAPESHATPGFEDIALSPEAFQARVFDWFDEHGRKHLPWQENTTPYRV
WVSEIMLQQTQVATVLPYYARFMERFPDVAALAAADIDDVLHLWTGLGYYARARNLHKAA
QQVVNEHDGAFPVESVEALSALPGIGRSTAGAIISISTGQRAPILDGNVKRVLARLHAVE
GWPGRPAVERKLWMLAERYTPQVRLADWTQAMMDLGATLCTRGSKPDCARCPFEEVCVAH
ARGEEKRFPESKPKKAIPTRQTLMLLVSDAAGKILLERRPPTGIWGGLWAPPLVEDREAA
REWVTREARGAHLEAPLASFEHVFSHFRLTITPQPVQLGEAGLAPAQAAGSVNESGADRR
FVDPAAPDAVGLPAPVKALLARCTDDLFGL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacctgacattgctgccacgccagacgtgacagctcccgagagccacgccaca
cccggcttcgaagacatcgccctgagccccgaggcgtttcaggcgcgcgtgttcgactgg
ttcgatgagcatggccgcaagcatctgccctggcaggagaacaccacgccgtatcgcgtg
tgggtctcggaaatcatgctccagcagacccaggtcgcgacggtgctgccgtactacgcc
cgcttcatggagcgcttcccggatgtcgcggcgctggcggcggcggatatcgatgacgtg
ctgcacctgtggacgggccttggctactacgcgcgggcgcgcaatctgcacaaggccgcg
cagcaggtcgtgaatgagcacgacggcgccttcccggtcgagagtgtcgaggcactgtcg
gccttgccgggtatcgggcgttcgaccgccggggcgatcatcagcatcagcaccggacag
cgggcgccgattctcgatggcaacgtcaagcgcgtgctggcacgcctgcatgccgtggaa
ggctggccgggacgtccggcggtggagcgcaagctgtggatgctggcggagcgctacacg
ccgcaggtgcggctggcggactggacccaggcgatgatggatctcggggccaccctgtgc
acgcgcggcagcaagccggattgcgcgcgttgccccttcgaggaggtctgcgtggcgcat
gcgcgtggcgaagagaagcgcttccccgagagcaagcccaagaaggccattccgacgcgt
cagacgctgatgttgctggtcagtgatgcggcggggaagatcctgctggagcgccgtccg
ccgacgggcatctggggcggcctgtgggcgccgccactggtcgaggaccgcgaggccgcg
cgggaatgggtcacccgcgaagcccgcggcgctcatctggaggcgccactggcgagtttc
gagcatgtcttcagccacttccggctgaccatcacgccgcagccggtacagctgggggag
gcagggcttgcgccagctcaagcggccgggagcgtcaacgagtcaggcgccgaccgccgc
ttcgtcgaccctgccgcgccggatgccgtgggcctgccggcgccggtcaaggcgctgctg
gcacgctgcacggatgatctgttcggcctgtga
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