Halomonas sp. SF2003: C8233_10335
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Entry
C8233_10335 CDS
T05423
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C8233_10335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haf03019
]
C8233_10335
Enzymes [BR:
haf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C8233_10335
Messenger RNA biogenesis [BR:
haf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C8233_10335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AVV33987
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Position
2511751..2513151
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AA seq
466 aa
AA seq
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MLKGFTRFLQRPGDRLKTLFNATDAPAAPLPSLRVIPRDEHPVSRRQLSENALKVLYRLQ
SGGYQAYLVGGCIRDALLGQRPKDFDVATNATPEQVRELFRNARIIGRRFRIVHVRFGRE
VIEVTTFRGKPADSTPSQHTQQSEDGMLLRDNVFGSIEEDALRRDFTINALYYDVSDFTI
HDWANGVRDIEARMIRLIGDPETRYREDPVRMLRAVRFAGKLDFDIEEATAEPMYELAPL
LLQIPPARMFEEVLKLFMSGYALETFHLLREFGLFQMLFPETEESFAHYHWSMPLIEKAL
ASTDDRIREDKPVTPAFLYAALLWPGVKARTDQLIASGMPDIPAAHQAAQQAIARQLNHT
SIPKRFSIPMREIWDMQAKLPRRRGKRAFQTREHPRFRAAYDFLLLREFAGEVKPGLGKW
WTDFQEVDARTQVTMIEGVSDEGPAGSKPVGTKRRGKRRRNGRGQG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaggatttacccgctttctacaacgccccggtgaccgcttgaagacgcttttc
aatgcaactgacgcgcccgcggccccattgcccagcctgcgtgtgataccgcgggatgag
catcccgtgtcccgccgccagctcagcgagaatgcgctgaaggtactctatcgcctgcaa
agcggtggatatcaggcctatctggtcggtggctgtatccgtgatgccctgctcggacaa
cgccccaaggacttcgacgtggccaccaacgccacgccggaacaggtccgcgagctgttc
cgcaatgcccgcatcatcggccgtcgtttccgtatcgtgcacgtgcgcttcggtcgtgag
gtgatcgaggtcaccaccttccgcggcaagccagccgatagcacgcccagccagcatacc
cagcagtcggaagacggcatgctgctgcgcgacaatgtcttcggctccatcgaggaggac
gcgctgcgccgcgacttcacgatcaatgccctctattacgacgtgtccgacttcacgatc
cacgactgggccaatggtgtacgcgatatcgaagcgcgcatgattcgcctgatcggtgat
ccggaaacacgctatcgcgaagatccggtgcgcatgctgcgtgccgtccgcttcgccggc
aagctggacttcgacatcgaggaggccacggccgaaccgatgtacgaactggccccgctg
ctgctgcagattccgccggcgcgcatgttcgaggaagtgctcaagctgttcatgtccggc
tatgcactggaaaccttccatctcctgcgtgagtttggcctgttccagatgctgttcccc
gagacggaagagagcttcgcgcattatcactggtccatgccgctgatcgagaaggcgctg
gccagcacggacgaccgcatccgcgaagacaagccggtcacgccggccttcctgtatgcc
gccctgctgtggccgggcgtcaaggcgcgtaccgaccagctgatcgccagtggcatgccc
gatattccggcagcccaccaggcggctcagcaggcgatcgctcgccagctcaaccatacc
tcgatcccgaagcgcttcagcattccgatgcgcgagatctgggacatgcaggccaagttg
ccgcgtcgccgtggcaaacgcgccttccagacccgcgagcatccgcgcttccgcgccgcc
tacgacttcctgctgctgcgcgaattcgccggcgaagtgaagccggggctgggcaagtgg
tggaccgacttccaggaagtcgatgctcgcacccaggtcacgatgatcgaaggtgtctcc
gatgaaggccccgccggcagcaagccggtcggcaccaagcgtcgcggcaagcgtcggcgc
aatggtcgcggccagggctga
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