Halomonas sp. SF2003: C8233_10375
Help
Entry
C8233_10375 CDS
T05423
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haf03016
]
C8233_10375
Enzymes [BR:
haf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C8233_10375
Transfer RNA biogenesis [BR:
haf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C8233_10375
Prokaryotic type
C8233_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AVV33995
LinkDB
All DBs
Position
complement(2520427..2521356)
Genome browser
AA seq
309 aa
AA seq
DB search
MARRRRGLPIDGVLLLDKPKGMSSNYALQKARRLYQAQKAGHTGTLDPMATGLLPVCFGE
ATKFSSHLLEADKVYRARIKFGQVTDTGDAEGTVIREREIPEIAQAELDAVLDRFRGEID
QVPPMYSALKHQGRPLYELARQGIEIERAVRRVTIYNMALLARHSDGIEIEVAVSKGTYI
RSLAEDIGEALGCGAHLTALRRLKTGPFTGDAMLDFERLEALADQQAREGVLLPVDILLD
HLPRLDITAEMARMILRGQQAETTTGSLEVDSLARVYQDQQLLGLVRIAAEGVIAPRRLL
SSAVEAAAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtcgcggcttgccaatcgatggcgttctgttgctggacaagcccaag
ggcatgtccagcaactatgcgctccagaaggctcgtcgcctctaccaggcgcagaaggcc
ggtcataccggcacgctcgacccgatggcgaccggcttgttgccggtctgcttcggggaa
gcgaccaagttctcctcgcatcttctcgaggcagacaaggtctatcgggcacggatcaag
tttggccaggtcaccgataccggtgatgcggaaggcacggtgattcgcgagcgggagatt
cccgagattgcgcaggccgagctggacgcggtgctggacaggttccggggcgagatagat
caggtaccgccgatgtactccgcgctcaagcaccagggacgtccgctctacgagctggcg
cgccaggggattgaaatcgagcgtgcagtccgtcgcgttaccatctacaatatggcgctt
cttgcgcggcactccgatggcatcgagatcgaagtggcggtcagcaagggtacctacata
cgcagtctggccgaggatatcggcgaggcgctgggctgtggagcccacctcacggcactg
cgtcgtctcaagacgggcccgttcacgggtgatgccatgctggatttcgagcgcctcgag
gcgctggctgaccagcaggcacgtgaaggcgttctgttacctgtcgacatcctgctcgat
catctcccgcgtctcgacatcaccgccgagatggcgcggatgatattgcgtggtcaacag
gctgaaacgacgacagggtcgctggaagtggactccctggctcgtgtgtatcaggaccag
cagttgctcgggctggtccggattgcggcggagggcgtcatcgctcctcgccgactgctc
agttctgccgtcgaggcggcggctgggtga
DBGET
integrated database retrieval system
