Halomonas sp. SF2003: C8233_10455
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Entry
C8233_10455 CDS
T05423
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00220
Arginine biosynthesis
haf00240
Pyrimidine metabolism
haf00250
Alanine, aspartate and glutamate metabolism
haf01100
Metabolic pathways
haf01110
Biosynthesis of secondary metabolites
haf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
C8233_10455 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C8233_10455 (carB)
00220 Arginine biosynthesis
C8233_10455 (carB)
Enzymes [BR:
haf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
C8233_10455 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_2
CoA_binding_2
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AVV34009
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Position
complement(2535614..2538844)
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AA seq
1076 aa
AA seq
DB search
MPKRTDLNSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPVM
ADATYIEPITWETVARIIEKERPDAILPTMGGQTALNCALALEREGVLEQYGVEMIGANA
DTIDKAEDRDRFDKAMKKIGLACPKAKVAHSMEEAWEIQAELGFPSIIRPSFTMGGSGGG
VAYNREEFEEICHRGFELSPTRELLIDESLLGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GVHTGDSITVAPAQTLTDKEYQLMRDASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGKTPASFEPSIDYVVTKIP
RFTFEKFPQANDRLTTQMKSVGEVMAIGRTFQESLQKALRGMETGVDGLDPIVENFSDEN
MARIKGELQAAGAERIFYIADAMRAGLDIEEIFRLTNIDRWYLVQLADLIAQEGAVAASS
LGEMDADRLFRLKRKGFSDARLARLMGVSEKAFRKHRQKQGIRPVYKRVDTCAAEFASDT
AYMYSTYEEECEAEVSDKKKIMVLGGGPNRIGQGIEFDYCCVHASLAMRADGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIADKEQPVGVIVQFGGQTPLKLARELEAAGVPI
IGTTPDAIDRAEDRERFQQMIEKLGLIQPENATARSFEEAFVKAEVIGYPLVVRPSYVLG
GRAMEIVYSAAELENYMTHAVKVSNDSPVLLDHFLNAAIEVDIDAVSDGKQVVIGAIMQH
IEQAGIHSGDSACALPPYSLPADVQEEMREQVKRMALELNVVGLMNVQLAWQDGVIYVIE
VNPRASRTVPFVSKCIGQSLAQIAARCMAGQTLEEIGFTQEIVPTFYSVKEAVLPFAKFP
GVDPILSPEMKSTGEVMGSGDTFAEAFYKAQLGAGEAIPTLTGDRKAFLSVREFDKAGVI
EVARSLVTLGFTLCATRGTAEVIAAAGLEVEPVNKVFEGRPHIVDMIKNGEIAYIVNTTE
GRQAINDSSVIRRTALAHKVPYATTLAGANAVCMALAYGNDVKVRRLQDMHAGVMI
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtacagacctaaacagcatcctgatcatcggcgccggccccatcgtcatc
ggccaggcgtgcgagttcgactattccggcgcacaggcctgcaaggccctgcgtgaagag
ggttaccgggtcatcctggtcaactccaacccggcaaccatcatgaccgacccggtgatg
gccgatgcgacctacatcgagccgatcacctgggaaaccgtggcgcgcatcatcgagaag
gagcgcccggacgccatcctgccgaccatgggcggccagaccgcgctgaactgtgcgctg
gcgctggagcgcgaaggcgtgctcgagcagtacggtgtcgagatgatcggtgccaacgcc
gacaccatcgacaaggccgaagaccgtgatcgcttcgacaaggcgatgaagaagatcggt
ctggcgtgcccgaaggccaaggtcgcgcactccatggaagaagcctgggaaatccaggcc
gagctgggcttcccgtccatcatccgtcccagcttcaccatgggcggttccggcggcggc
gtggcgtacaaccgtgaagaattcgaagagatctgccatcgcggcttcgaactgtcgccg
acccgcgagctgttgatcgacgaatcgctgctgggctggaaggaatacgagatggaggtc
gttcgtgacaagaacgacaactgcatcatcgtctgcgccatcgagaacttcgacccgatg
ggcgtgcacaccggtgactccatcactgtcgccccggcccagaccctgactgacaaggaa
taccagctgatgcgtgatgcatcgctggccgttctgcgcgagatcggcgtcgagaccggc
ggttccaacgtccagttcggcatctgcccggacactggccgcatggtcgtgatcgagatg
aacccgcgcgtgtcgcgttcctcggcgctggcttccaaggcgaccggcttcccgatcgcc
aagatcgccgccaagctggccgtcggctacaccctggacgagctgcagaacgacatcacc
ggtggcaagacgccggcgtccttcgagccgtccatcgattacgtcgtcaccaagattccg
cgcttcaccttcgagaagttcccgcaggccaatgaccgtctgaccacgcagatgaagtcg
gtcggcgaagtcatggccatcggccgtaccttccaggaatccctgcagaaggcgctgcgt
ggcatggagaccggcgttgacggtctcgatccgatcgtcgagaacttcagcgacgagaac
atggcgcgtatcaagggcgagctgcaggccgccggtgccgagcgtatcttctacatcgcc
gatgccatgcgtgccggtctcgatattgaagagatcttccgcctcaccaacatcgaccgc
tggtacctggtgcagctggccgacctgatcgctcaggaaggcgcagtggctgcaagctcg
ctgggcgagatggacgctgatcgtctgttccgtctcaagcgcaagggcttcagcgatgcg
cgtctggcgcgtctgatgggcgtgtccgagaaggcgttccgcaagcaccgtcagaagcag
ggcatccgtccggtctacaagcgcgtcgacacctgtgccgccgaattcgcgtccgacacc
gcctacatgtactccacctatgaggaagagtgcgaggcggaagtcagcgacaagaagaag
atcatggtgctgggtggcggtccgaaccgtatcggtcagggcatcgagttcgattactgc
tgtgtccacgcctccctcgccatgcgcgcggacggctacgagaccatcatggtcaactgc
aacccggaaaccgtgtccaccgactacgacacttccgatcgcctctacttcgagccggtc
accctggaagacgtgctggagatcgccgacaaggaacagccggtcggtgtcatcgtccag
ttcggtggccagacgccgctgaagctggcgcgtgagctcgaagccgccggtgtgccgatc
atcggtaccacgccggatgccatcgaccgtgccgaagaccgtgagcgtttccagcagatg
atcgagaagctcggtctgatccagccggaaaacgccaccgcgcgcagcttcgaggaggcc
ttcgtcaaggccgaggtcatcggttacccgctggtggtgcgcccgagctacgtgctgggc
ggccgcgcgatggaaatcgtctactccgccgccgagctcgagaactacatgacccacgcg
gtcaaggtctccaatgactcgccggtgctgctggaccacttcctgaacgcggccatcgag
gtcgacatcgacgcggtgtccgacggcaagcaggtcgtgatcggcgccatcatgcagcac
atcgagcaggccggtatccactccggtgactccgcgtgcgcactgccgccgtactcgctg
ccggcagacgtccaggaagagatgcgtgagcaggtcaagcgcatggcgctggagctcaac
gtcgtcggcctgatgaacgtgcagctggcctggcaggatggcgtgatctacgtcatcgag
gtcaacccgcgcgcttcacgtaccgtgccgttcgtctccaagtgcatcggccagtcgctg
gcgcagatcgccgcacgctgcatggccggccagactctggaagagatcggtttcacccag
gaaatcgtgccgaccttctacagtgtgaaggaagcggtgctgccgttcgccaagttcccg
ggggtcgacccgatcctgtcgccggaaatgaagtccaccggcgaagtgatgggctccggc
gataccttcgcggaagccttctacaaggcgcagctgggtgccggtgaagccatcccgacc
ctgactggcgatcgcaaggccttcctgtccgtgcgtgagttcgacaaggcgggcgttatc
gaggtggcccgctctctggtaacattaggctttacgctttgtgctacccgtggcacggca
gaggtcatcgccgctgccggcctcgaggttgaacccgtcaacaaggtgttcgaagggcgg
ccgcatatcgtcgacatgatcaagaacggcgagatcgcctatatcgtcaacaccacggag
ggacgtcaggccatcaatgactcgtccgtgatccgtcgcacggcgctggcgcacaaggtg
ccctacgccacgacgctggcgggtgccaatgccgtgtgcatggcgcttgcctacggcaac
gacgtcaaggtccgtcgtctccaggatatgcatgcaggagtcatgatatga
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