Halomonas sp. SF2003: C8233_11085
Help
Entry
C8233_11085 CDS
T05423
Symbol
waaF
Name
(GenBank) lipopolysaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00540
Lipopolysaccharide biosynthesis
haf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C8233_11085 (waaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
C8233_11085 (waaF)
Enzymes [BR:
haf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
C8233_11085 (waaF)
Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
Core region
C8233_11085 (waaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AVV34116
LinkDB
All DBs
Position
complement(2675126..2676145)
Genome browser
AA seq
339 aa
AA seq
DB search
MSERILVVGPSWVGDMVMAQSLFMTLKQRSPGCRISVLAPAWSQPIIERMPEVEEALALP
AGHGDFALKARWQLGRSLRGRFDRAIVLPRSWKAALVPFFARIPVRVGFIGEQRYGLLTE
CRKLDKSVLDQTVKRFTSLGLPVEEANPPVGIPEPALVTDSANQLRLRGELGLVAPPAPI
IGMMPGAEYGPAKQWPLAHFRALAESLTRQGAEVRIFGGPKDVAAGEEIAQGLAGVHNLC
GKTRLADAVDLIAECREVVSNDSGLMHVAAAVGARIQGIYGSSSPHYTPPLTANREIHWL
ALECSPCFKRVCPLGHTNCLNHIAPERLLAAISLDEDAR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcgcattctggtggtcgggcccagctgggtcggcgacatggtgatggcgcag
agcctgttcatgacgctgaagcagcgctcgcccggctgccggatcagtgtgctggcgccc
gcctggtcgcagccgatcatcgagcgcatgcccgaggtcgaggaggcactggcgttgccg
gcggggcatggtgacttcgccctcaaggcgcgctggcagctcgggcgttcgctgcgtgga
cgcttcgaccgcgccatcgtgttgccgcgctcgtggaaggcagcgctggtgccgttcttc
gcgcgcattccggtgcgcgtcggcttcatcggtgagcagcgctacggcctgctcaccgag
tgccgcaagctcgacaagtcggtgctcgatcagaccgtcaagcgcttcacgtcgctgggc
ttgcccgttgaggaggccaatccgccggtgggcatcccggagcccgctctggtcactgac
agcgccaatcagctgcgcttgcgcggcgagttggggctggtggcgccgccggcccccatc
atcggcatgatgcccggggcggaatatggcccggccaagcagtggccgctggcgcacttt
cgcgcgcttgccgagtcattgactcgccagggggccgaggtgcgcatcttcggtggcccc
aaggatgtcgcggcgggggaggagatcgcccaggggcttgcgggcgttcacaacctgtgt
ggcaagacgcggctggcggatgcagtggacctgatcgccgagtgtcgggaagtggtcagc
aatgactccggcctgatgcatgtggcggccgcggtaggggcccgtatccagggcatctac
ggttcctcgtcgccgcattacacgccgccgctgacggccaatcgcgagatccactggctg
gcgctggagtgttcaccctgcttcaagcgcgtctgcccgctggggcataccaattgtctg
aaccatattgctcccgagcgactgttggcggcgatctcgctggatgaggatgcgcggtga
DBGET
integrated database retrieval system
