Halomonas sp. SF2003: C8233_11360
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Entry
C8233_11360 CDS
T05423
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haf03009
]
C8233_11360
Enzymes [BR:
haf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
C8233_11360
Ribosome biogenesis [BR:
haf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C8233_11360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AVV34167
LinkDB
All DBs
Position
2739371..2740681
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AA seq
436 aa
AA seq
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MTDRDASLTRLNKFISETGFCSRREADRYIAEGRVTINGVVPEMGTKVAPGDEVLVNGKP
LKAKQEAVYLAFNKPVGITCTTECHVDGNIIDYIGHPKRIFPIGRLDKPSDGLIFLTSDG
DIVNKILRAGNAHEKEYVVRVDKPINGDFLKRMAAGVPILDTITQPCRIEQISTYVFRII
LTQGLNRQIRRMCEALGYEVFKLKRVRIMNVSLDGLGVGEWRYLTQREMADIQQMIEGSS
GTEEASRLAAAPPPSQHATAARHQRAAQDTDAGRRSGTRRQEGGKSGSGQRSPDKRETRQ
RGADQRHPGQRSGAKQEGAGRRERSDERTTGRGNQEGRSDGRNSSRNATKSAGGAGKLAS
GLKPRTRGNASDGRNERGSANSNTAANKGSANSKTAANKGGGSKSYGNTSSGKNSPTGKG
ASYKGGGSSNGGRGRR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgcgacgcatcgcttacccgcctcaacaagttcatcagcgaaacgggcttc
tgctcgcgacgcgaggcggatcgctacatcgccgaaggacgagtgaccatcaatggtgtc
gtgcccgaaatgggcaccaaggtcgcgccgggcgatgaggtgctggtcaatggcaagcca
ttgaaagccaagcaggaagcggtctacctggccttcaacaagccggtgggcatcacctgt
accaccgagtgccatgtcgatggcaacatcatcgattacatcggtcatcccaagcgcatc
ttcccgatcggtcgcctcgacaagccctccgatggcctgatcttcctgaccagtgacggc
gatatcgtcaacaagatcctgcgtgccggcaatgcccacgagaaggaatacgtggtgcgg
gtcgacaagccgatcaacggcgacttcctcaagcgcatggccgctggcgtgccgattctg
gacaccatcacccagccgtgtcgcatcgagcagatctcgacctatgtgttccgcatcatc
ctgacccagggcctcaaccgtcagatccgtcgcatgtgtgaggcgctgggctatgaggtc
ttcaagctcaagcgggtgcgcatcatgaatgtcagcctggacgggctgggagtcggcgaa
tggcggtatctcacccagcgcgagatggcggatatccagcagatgatcgagggctccagc
ggcactgaggaagcctcgcgcctggcggcggcaccgcctccttcccagcatgcgacggcc
gcgcgccatcagcgcgccgcccaggatacggacgctggccggcgtagcgggactcggcgt
caggaaggtggcaagagcggatccggccagcgcagccctgataagcgcgagacacgtcag
cgcggtgctgatcaacgccatcccggccagcgttcaggagccaagcaggagggtgcaggg
cgtcgcgagcgttctgacgagcgcaccacggggcgtggcaatcaggaaggcagaagcgac
ggcaggaattccagcaggaatgccaccaagagtgcgggcggcgccggcaagcttgccagc
ggcctcaagccgcgcacgcgtggcaatgccagcgatggccgcaatgagcgtggctctgcc
aacagcaataccgctgccaacaagggctctgccaacagcaagaccgctgccaacaagggc
ggcggcagcaagagttacggcaacacgagctcggggaaaaacagcccgactggcaagggc
gcctcgtacaagggcggcggttcttccaacgggggacgcggtcgccgctag
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