Halomonas sp. SF2003: C8233_12160
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Entry
C8233_12160 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haf03009
]
C8233_12160
03016 Transfer RNA biogenesis [BR:
haf03016
]
C8233_12160
Enzymes [BR:
haf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
C8233_12160
5.4.99.29 23S rRNA pseudouridine746 synthase
C8233_12160
Ribosome biogenesis [BR:
haf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C8233_12160
Transfer RNA biogenesis [BR:
haf03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
C8233_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AVV34300
LinkDB
All DBs
Position
complement(2918154..2919197)
Genome browser
AA seq
347 aa
AA seq
DB search
MAPSRPPVCVWTACASSSPWMPTSVELTAGVSDAPETPHLPSAGGAFCRVRQRQWPGGLA
RSTSGRDDAIACVPRFAAHHFRFTPIVSLLQSTLMARSYPESDEAASGQSWQGERLAEEG
ERVAKVGLSLLAAGDDWWAIDKPAELPSVPGRDPSRFDSVHSRLCQLSDDSRAVHRLDVA
TSGVLLVARNVEGQRRLSRLFQSRTIEKCYLAVVAGHLTPAEGSIALPLRCDWPRRPRQI
VDFTHGKSALTHYRVEQYLTLEGQRPDGTSQTLAASRVSLTPHTGRSHQLRLHMLALGHP
IIGDGFYARGAALNASPRLLLHAARLVIPPASDSDAPPLVLEAPLPF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatcgagaccacccgtctgcgtctggacagcgtgcgcgtcatcgtcaccgtgg
atgcccacgagcgttgagctgaccgcaggcgtcagtgatgcacctgaaacgccccacctg
ccatcggcaggtggggcgttttgccgtgtgcgccagcgacaatggcccggtggacttgcc
agatcgaccagtggccgcgacgatgccatcgcttgcgtgccacgattcgcggcccatcac
ttccgcttcacccctatcgtttcattactacagagcaccctcatggcgagatcatatcca
gagagcgacgaggcagcgtcagggcagagctggcagggagagcgcctggccgaggaaggc
gagcgtgtcgcgaaggtggggctgtcgctgctggcggcgggcgatgactggtgggccatc
gacaagccggccgagctgccctcggtgccggggcgtgatccgtcgcgcttcgacagtgtc
cattcgcgcctgtgtcagctgagcgacgatagccgcgccgtgcaccgcctggatgtggcg
acctccggggtgctgctggtggcgcgcaacgtggagggccagcggcggctgtcgcggctc
ttccagtcgcgcaccatcgagaaatgctacctggccgtggtagcagggcatctcacgccc
gccgagggcagcatcgccctgccgctgcgctgtgactggccacgccgcccgcgtcagatc
gtcgacttcacgcatggcaagtcggcactgacgcattatcgggtcgagcagtatctgacg
ctcgagggccagcgcccggatggtacgtctcagactctcgccgccagccgtgtatcgctg
acgccgcataccgggcgctcacaccagctacgcctgcatatgctggcgctcggccatccg
atcatcggcgatggcttctatgcgcgcggagcggcactcaatgccagcccgcgcctgttg
ctgcatgcggcgcgcctggtgattccgccagccagcgacagcgatgcgccgccactggtg
ctggaagcgccgctgcccttctag
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