Halomonas sp. SF2003: C8233_12315
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Entry
C8233_12315 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
haf02044
]
C8233_12315
02035 Bacterial motility proteins [BR:
haf02035
]
C8233_12315
Secretion system [BR:
haf02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
C8233_12315
Bacterial motility proteins [BR:
haf02035
]
Pilus system
Pilus assembly proteins
C8233_12315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AVV34329
LinkDB
All DBs
Position
2948102..2951488
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AA seq
1128 aa
AA seq
DB search
MKSKHSPRRSGLRCIHLPVLLSGGLLVALPVLADSDTLLQLPTTQSVGVTPNVLLLLDDS
GSMSFEDTFEGGDSKRGYNLVYAWYYKSKQCQYNGCGVEFRPIYNLSNDYFCVAENFQAY
DPDQTYLPWKKGDGDDRYEDMDPTSAWINFDQGDSYYNQVDLTDPSLEYRYYTGDKCKDK
NEVQVSELGPEEQVNYANWFTYYRDRLGVGKAAALELLAGTEYRTGYLTINPRNGSEKAV
VDNIVDQIVELVTNVLGDLVELITNSDSGNGHLTKVRDAIVNSEISTSNTYRSTPLREAL
YRAGEYYRDNYSYLGSSPIVSADEGGMCQQNFTVLITDGFWNSEDSSASTAIKDNIGDAN
GDGRTWRQSNGRSGGDATLADVAYYYANIDLRDDLGSGTYEKQVMTTYTVAFGVDSDSDE
WSSNKRVTESSSSTIDDLEQAAIDGGGSYFNASSPTDLVSALAAIASEIVAVGNSVSGLS
TNLTTASVETDSQLIESRYSASTWTGDVVASSVQEGKDVEDDDQVWSAATQLSEALEEKD
GVESRTVFTMSGGNGVEFTTDNAGRLSSSQRNDLARMEVGGNSTDDHVEAAIEWLRGSDE
YEGDGLRNRTGVQLGDIIGSSPVVVTQEDSTTEGSVFVGANDGMLHAFDLKTGNEQFAYI
PELLYSEEDDAGLGYLTDPGYQHRYYVDGELRLASLNGEEWLVSGLAGGGRGLFALNVTK
AVAGEDFDEDDVVRWEFGASDDDDMGHVYGSAHIVTLNNGDSAVLVGNGLETADENAAPT
LFALELDGVNAGGVIAKLSPSGVTGGLANLQVADLDSNGTVDFAYGGDLQGRLWKFDLSD
DDSSKWSVTRLFTACATSLTGGECQTDALQPITVKPTLSRYSGETHTMASPNLLVSFGTG
QDMYADAEDEAWVTQSLYTVLDTGGSHTSLTRSDLEARNFVSGSYTNGELTGRTLGGDSF
AYYPSQLEDQDTDRFGWYLDLDASEQEELVEPANLLSNLVVFSTSTSSTGTNFCESTGGG
WLVALDTETGLPTYDDSEGSYVTIFDFNQDEAFSADDLVGTLVDDTVAVGNVIVSVKLSG
TPTSSVSVGDTVYVGTSSLGSEEGGVSSYDLNVSSSTDTGRVSWYQLR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaagcactcaccccgccgcagcggcttgcgttgtattcacctgccggtcttg
ctgtcaggcggactgctggtcgcattgcccgtgctggcagacagcgacacgctactccag
ctgcccaccacccagagtgtcggcgttacgcccaacgtacttttgcttttggatgactcc
gggtcaatgtcattcgaagataccttcgagggcggggattctaagcgcggttacaatctt
gtttatgcttggtattataaaagcaagcagtgtcaatataatggttgtggtgtagagttt
aggccgatttataatctatccaatgattatttttgtgttgctgaaaacttccaggcttat
gaccctgatcaaacttatctgccttggaagaaaggggatggagatgatcgatatgaggat
atggatccgacttctgcctggattaatttcgatcaaggagatagctattataaccaggta
gatcttactgatccaagtctcgagtataggtattatacaggcgataagtgtaaggataaa
aatgaggttcaggtatcagagttagggcctgaagagcaggtaaactatgctaattggttt
acatactatcgcgatcgtttaggtgttggtaaagctgcagcattggaattactggccggt
actgaatatcgaacaggttatcttactataaatccccgtaatggtagcgaaaaagctgtc
gttgataatattgttgatcaaattgtcgagcttgtgaccaatgtcttgggtgatctagtt
gagttgattaccaatagtgatagtggtaacggccacctgactaaagtaagagatgctatt
gtcaactctgagatcagtaccagtaatacctatcgaagtacaccgctacgagaagccctg
tatcgtgctggggaatattaccgcgataattactcctatctaggctcttcacctatcgtg
tcggctgatgaaggtggcatgtgtcagcagaatttcaccgttctgataacggatggcttc
tggaattcagaggactcatcagcttctacggccatcaaggataatattggtgatgccaat
ggtgatggtcgtacctggcgccagagcaatggccgatctggtggtgatgccaccttggcg
gatgtcgcttattattatgccaatattgatttacgcgatgatctgggcagtggtacctat
gaaaagcaggtgatgacgacgtataccgtcgctttcggtgtggactccgacagtgatgag
tggagcagcaataagcgtgtcaccgaaagcagctccagcaccatcgatgatctggagcag
gcggcgatcgatggcgggggctcctacttcaatgcctccagtccgacggacctcgtctcg
gccctggcggcgatcgcctccgagatcgtcgcggtaggcaacagtgtcagcggcctctcc
accaacctgacgacggccagtgtcgagacggatagccagctgatcgagagccgctattcc
gcctcgacctggacgggggatgtggtggcctcgtcggtacaggagggcaaggatgtcgag
gatgacgaccaggtctggagtgctgccacccagttgagtgaggcattggaagagaaggat
ggtgttgagtcgcggacggtcttcaccatgtccggcggcaacggagtcgagttcacgacc
gacaacgcgggccgcctgagctccagccagcgcaatgatctcgcgcgcatggaggtcggt
ggcaactccactgatgaccatgtggaggcggcgatcgagtggctgcggggcagcgatgaa
tacgaaggtgatggtctgcgcaatcgcactggcgtccagctgggcgacatcatcggctcg
tcgcctgtcgtcgtgactcaagaagactcgacgacagagggcagtgtcttcgtcggggcc
aacgacggcatgctgcatgccttcgacctcaagaccggcaacgaacagttcgcctatatt
ccggaactgctctacagcgaagaggacgacgcagggctggggtatctgacggacccgggc
tatcagcatcgctactatgtcgacggtgaactgcgtctggccagcctgaatggtgaggag
tggctggtatccggtctcgctggcggtggacgcggcctgttcgcgctcaatgtcaccaag
gccgtggcaggcgaagacttcgacgaagatgatgtggtgcgctgggaattcggtgccagc
gacgatgatgacatggggcatgtctacggcagcgcgcatatcgttaccctcaacaacggc
gacagcgcggtgttggtcggcaacgggctggaaacggccgatgagaacgccgcgccgacg
ttgttcgcgctggagcttgatggagtcaatgccggcggcgtgatcgccaagctgtccccc
agcggagtgaccggcggattggcaaacctgcaggtcgcggacctcgacagcaatggcacc
gtcgatttcgcctatggcggagacctgcaggggcggctgtggaagtttgacctcagtgac
gacgacagcagcaagtggagtgtcacgcgcctgttcacggcctgtgctaccagcctgacc
ggcggggagtgccagacggacgcgttgcagccgatcaccgtcaagccgacgctcagccgc
tactccggcgagacgcacaccatggcctcgcccaatctgctggtgtccttcgggaccggc
caggacatgtatgccgacgccgaagatgaagcctgggtcacgcagagcctctacaccgtg
ctggatactggcggcagtcataccagcctgacgcgcagtgaccttgaggcacgcaacttc
gtcagcggcagctacaccaacggcgagctgacaggccggacccttggcggcgacagcttt
gcctactatcccagccagctcgaggatcaagacacggatcgcttcggctggtatctggat
ctggacgcctccgagcaggaagagctggtcgagccggccaatctgctctccaacctggtg
gtcttctccaccagcacgtccagtaccggaaccaacttctgtgaaagtaccggtggtggc
tggctggtcgcgctggataccgagacaggcctgccgacctatgacgatagcgaaggcagc
tacgtgaccatcttcgatttcaatcaggatgaggccttcagcgctgatgacctggtcggt
accctcgttgatgacaccgtcgccgtcggcaatgtcatcgtcagcgtcaagttgagcggt
acaccgacgtccagtgtcagtgtcggcgatacggtctacgtgggcaccagttcgctgggc
agcgaggagggcggtgtctcctcctatgatctcaacgtgtccagctcgacggacaccggc
cgtgtctcctggtatcagctgcgctga
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