Halomonas sp. SF2003: C8233_12355
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Entry
C8233_12355 CDS
T05423
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
haf03110
]
C8233_12355 (clpB)
Chaperones and folding catalysts [BR:
haf03110
]
Heat shock proteins
HSP100
C8233_12355 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_24
AAA_18
ATPase_2
TniB
AAA_14
nSTAND3
IstB_IS21
AAA_7
NBD_SMAX1
bpMoxR
DUF815
AAA_25
NACHT
DNA_pol3_delta2
T2SSE
EHN
Motif
Other DBs
NCBI-ProteinID:
AVV34337
LinkDB
All DBs
Position
2958648..2961296
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AA seq
882 aa
AA seq
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MRIDKLTSKLQNALADAQSLAVGRGHNEIHPQHLLLALLEDRDGGLKALVNKAGGDATSL
MSGLKCQLDDLPTVSQFDGNVAPSQALGKLLNLADREAQKRGDQFIASELALLAALELGG
DLGKLFTSSGIKKPALTSAIDALRGGEAVGDADAENNREALNKYTLDLTERARDGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLASRIVNGEVPEGLKNKRVLSL
DMGSLLAGAKFRGEFEERLKSVLKELAQEEGQVILFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVQVDQPSEEDTIAILRGLKERYEVH
HGVDITDSAIIAAARLSSRYITDRQLPDKAIDLIDEAASRIRMELDSKPEEMDRLDRRLI
QLKMEREALKKETDEAALKRLGALEDQISELEREYADLDEVWKSEKSSIQGAAQFKAELE
QARIDLEQARRAGDLSRMSELQYGVIPGLEKQISEAGEGEADTSAHVLLRSNVTEEEIAE
VVSRWTGIPVAKMLEGERDKLLRMEEALHEKVIGQDEAVIAVSNAVRRSRAGLSDPNRPN
GSFLFLGPTGVGKTELCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE
GGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTS
NLGSEMIQRMSGLNGELAEDEGSTESADERAERKAAFQYDDMKTAVMEVVGNHFRPELIN
RIDEVVVFHALGQAQIASIAGIQLERLKARLAERDLGFEITDPAMALLAKAGFDPVYGAR
PLKRAIQSRIENPLAQALLGGDFVPGDVIRVGEEGGELTFTR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgacaaactcaccagcaagctgcagaacgctctggcggatgcccagtcgctc
gccgtcgggcgaggccacaatgaaattcacccgcagcatctgctgctggctctgctggaa
gaccgcgatggcggtctcaaggcactggtcaacaaggcgggcggcgatgccaccagcctg
atgagcggcctcaagtgccagctggatgacctgcccaccgtgtcccagttcgacggcaat
gtcgcgccctcgcaggccctcggcaagcttctgaatctggccgatcgcgaagcgcagaag
cgcggcgatcaattcatcgcctccgagctcgcgctgctggctgcgctggagctgggtggt
gatctgggcaagctgttcacctcctcgggcatcaagaagcccgccctgacgtccgccatc
gatgcgctgcgcggtggcgaagccgtgggcgatgccgatgccgagaacaatcgcgaagcg
ctcaacaagtacaccctggatctgaccgagcgtgcgcgggatggcaagctcgacccggtg
atcgggcgcgatgaggaaattcgccgcacgatccaggtgctgcagcgtcgcaccaagaac
aacccggtgctgatcggtgagcccggcgtcggcaagaccgccatcgtcgaagggctggcc
agccgtatcgtcaatggcgaggtgccggaaggcctcaagaacaagcgcgtgctgtctctc
gacatgggctcgctgctggcgggggccaagttccgcggcgaattcgaggagcgcctcaag
tcggtgctgaaggagctggcgcaggaagaaggccaggtcatcctgttcatcgacgagctg
cacaccatggtcggcgcgggtaaggccgaaggcgcgatggatgccggcaacatgctcaag
ccggcgctggcgcgtggcgagctgcactgtgtcggtgccaccacgcttgacgagtatcgt
cagtacatcgagaaggacgccgcacttgagcgccgcttccagaaggtgcaggtcgaccag
cccagcgaggaagacaccatcgccatcctgcgtggcctgaaggagcgctatgaggtgcac
cacggggtcgacatcaccgacagcgccatcatcgccgccgcgcggctgtcctcgcgctac
atcacggaccgtcagctgccggacaaggcgatcgacctgatcgatgaggccgcgtcacgc
atccgcatggagctggattccaagccggaggagatggaccgtctcgaccgccgcctgatc
cagctcaagatggagcgtgaagcgctcaagaaggaaaccgacgaggcggcgctcaagcgc
ctcggcgcgcttgaggaccagatctcggagctggagcgggaatacgccgacctcgatgag
gtctggaagtccgagaagtccagcatccagggcgcggcccagttcaaggccgagctggag
caggcgcgtatcgatctggagcaggcacgccgcgccggtgacctcagccgcatgtcggaa
ttgcagtacggcgtgattccggggctcgagaagcagatcagcgaagcaggagaaggcgag
gcggatacctccgcccacgtgctgctgcgctccaatgtcaccgaggaggagattgccgag
gtcgtctcgcgctggaccggcattccggtcgccaagatgctcgaaggcgagcgtgacaag
ttgctgcgcatggaagaggcgctgcacgagaaggtgatcggccaggacgaggcggtgatc
gcggtgtccaatgcggtgcgtcgctcacgcgctgggctgtcggacccgaaccgtcccaac
ggctccttcctgttcctcggcccgaccggtgtcggcaagacggagctctgcaagtcactg
gccaacttcctgttcgacaccgaagaggcgatggtgcgcatcgacatgtccgagttcatg
gagaagcactccgtggcccgcttgatcggcgcgcctcccggctatgtcggctatgaagag
ggcggctatctgaccgaggccgtgcgtcgcaagccgtactccgtgctgctgctcgacgag
gtcgagaaggcgcatccggatgtcttcaacatcctgctgcaggtgctggaagatggccgc
ctgaccgatggtcaggggcgtaccgtcgacttccgcaacaccgtgatcgtgatgacctcc
aatctgggctcggaaatgatccagcgcatgagcggtctcaatggcgagctggcggaagac
gagggcagtacggaaagcgccgacgagcgtgccgagcgcaaggcggccttccagtacgac
gacatgaagacggcggtgatggaagtcgtcggcaatcacttccgtccggagctgatcaac
cgcatcgatgaagtggtcgtgttccacgcgctggggcaggcgcagatcgcctccatcgcg
ggcattcagcttgagcgtctcaaggcgcgtctggccgagcgtgatctcggcttcgagatc
accgacccggcgatggccttgctggccaaggcaggcttcgatccggtctatggcgctcgc
ccgctcaagcgcgccatccagagccgcatcgagaacccgctggcccaggccctgctgggc
ggcgacttcgtgcccggtgacgtcatccgtgtcggcgaagagggcggggagctgaccttc
acgcgctga
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