Halomonas sp. SF2003: C8233_12720
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Entry
C8233_12720 CDS
T05423
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C8233_12720 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
haf01007
]
C8233_12720 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haf03016
]
C8233_12720 (lysS)
Enzymes [BR:
haf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C8233_12720 (lysS)
Amino acid related enzymes [BR:
haf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C8233_12720 (lysS)
Transfer RNA biogenesis [BR:
haf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C8233_12720 (lysS)
Prokaryotic type
Other AARSs
C8233_12720 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AVV34393
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All DBs
Position
3047736..3049274
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AA seq
512 aa
AA seq
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MSTEQTPAIDEQQAAEQAQEENRLIAERRAKLNARREQAAAEGKSAFPNDFRRDSLAADL
MEELGEKDKAELETLDRKAAVAGRIMRKRGPFIVLQEVSGQIQLYVDKKGLPEALLEDIK
SWDIGDIVGASGPVHKSGKGDLYVMIESAQLMTKNLRPLPDKFHGLSDQEMRYRQRYVDL
IMNEQSRRTFALRAGIVASIRRFLSDRGFMEVETPMLQQIPGGATARPFITHHNALDMEM
YLRIAPELYLKRLVVGGFERVFEINRNFRNEGLSTRHNPEFTMLEFYWAYADYRDLIALT
EDMIRTAAQEVLGTTQITCQGSEYDLSQPFIQMTMRESIIKYGDGITEADLADYDAARAT
AERLGIQVKPIWGLGKLETEIFEEVAEHRLDQPTFITEYPAEVSPLARRNDANPHVTDRF
EFFVGGREIANGFSELNDAEDQAERFQAQVAEKDAGDDEAMFYDADYVRALEYGMPPTAG
EGIGIDRLVMLLTDSASIRDVLLFPAMRPQQG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagagcagacccccgccattgatgagcagcaggccgccgaacaggctcaggaa
gagaaccgcctgatcgccgaacgtcgcgccaagctgaacgcccgccgcgagcaggccgcc
gccgaaggcaagagtgccttcccgaatgatttccgtcgtgacagcctcgccgctgacctg
atggaagagctgggcgagaaggacaaggccgagctggagacgctggaccgcaaggccgcc
gtcgccgggcgtatcatgcgcaaacgtggccccttcatcgtgctgcaggaagtctccggc
cagattcagctctacgtcgacaagaagggcctgccggaagcgctgcttgaggacatcaag
agctgggatatcggtgacatcgtcggtgccagtggtccggtgcacaaatccggcaagggc
gatctgtacgtcatgatcgaaagcgcccagctgatgaccaagaacctgcgtccgctgccg
gacaagttccacggtctgtccgatcaggaaatgcgctatcgccagcgttatgtcgacctg
atcatgaacgagcagtcacgccgcaccttcgcgctgcgtgcaggcatcgtcgcctccatc
cgtcgcttcctcagcgatcgcggcttcatggaagtcgagacgccgatgctgcagcagatt
ccgggtggcgcgaccgcgcgtccgttcatcacgcaccacaatgcgctggacatggaaatg
tacctgcgcatcgcgccggagctgtacctcaagcgtctggtggtgggcggcttcgagcgc
gtgttcgagatcaaccgcaacttccgcaacgaagggctgtcgacgcgtcacaaccccgag
ttcaccatgctcgagttctactgggcctacgcggactaccgtgacctgatcgcgctcacc
gaggacatgatccggactgccgcgcaggaagtgctcggcactacgcagatcacctgtcag
ggcagcgagtacgacctgagccagccgttcatccagatgaccatgcgcgagtcgatcatc
aagtacggcgatggcatcaccgaagccgacctggccgattacgacgccgcgcgcgccacg
gcggagcgtctcggtatccaggtcaagccgatctgggggctgggcaagctcgagaccgag
atcttcgaggaagtcgccgagcaccgtctcgaccagccgaccttcatcaccgaatatccg
gccgaagtcagcccgctggcgcgtcgcaacgatgccaacccgcacgtgaccgatcgcttc
gagttcttcgtcggtggccgcgagatcgccaatggcttctcggagctcaacgacgccgaa
gaccaggccgaacgcttccaggcccaggtggccgagaaggacgccggtgatgacgaagcc
atgttctacgacgccgactacgtgcgcgcgctggaatacggcatgccgccgaccgccggt
gaaggcatcggcatcgaccgtctggtgatgctgctgaccgacagcgcctccatccgcgac
gtgctgctgttcccggcgatgcgtccgcagcagggctga
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