Halomonas sp. SF2003: C8233_12770
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Entry
C8233_12770 CDS
T05423
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haf03021
]
C8233_12770 (rpoH)
Transcription machinery [BR:
haf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C8233_12770 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AVV34403
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Position
3057186..3058061
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AA seq
291 aa
AA seq
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MSTSLQPLGHLSPGQDLNGYIQSVNRIAVLTAEEEHELALRLHEENHLESARRLVMSHLR
FVVHIARSYSGYGLQQADLIQEGNVGLMKAVKRFDPHQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKVATTKAQRKLFFNLRGAKKRLAWLNNDEVDAIAGDLDVKPAVVREMESRLSAHD
AGFDAGPSDDESSAYQAPANYLEDHSLDPAAQVEQQDLEDDSHGRLLKALAALDERSRDI
LQQRWLSDNKSTLHELADIYGVSAERIRQLEKNAMKKLRESMGDMSEGFAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagtcttcagccacttggccacctgtcaccgggtcaagatctaaacggctat
attcagtcggtgaaccgtatcgctgtgcttactgccgaagaagagcatgagctggccctg
cggttgcatgaagagaatcatctggagtcggcccgtcgactcgtcatgtcgcacctgcgc
ttcgtcgtgcatatcgcgcgcagttacagcggctatggcttgcagcaggcggacctgatc
caggaaggtaatgtcggcctgatgaaggcggtcaagcgtttcgacccgcaccagggcgta
cgcctcgtctcctttgccgtgcattggatcaaggccgagattcacgagttcgtgctgcgc
aactggcgcatcgtgaaggtcgcgaccaccaaggctcagcgcaagctgttcttcaacctg
cgtggcgccaagaagcgtctggcatggttgaacaacgatgaagtggatgccatcgcgggc
gatctggacgtcaaacctgccgtggtgcgtgagatggaaagccgtctctccgcccacgat
gcaggcttcgacgccggccccagcgacgacgagagctctgcctatcaggcgcccgccaac
tatctggaagatcacagcctcgatccggctgcccaggtggaacagcaggacctggaagac
gactctcacggtcgtctgctcaaggcgctggcggcactggatgagcgctcacgcgacatc
ctccagcagcgctggctgagcgacaacaagtcgactctgcacgagcttgccgacatctat
ggcgtctctgccgagcgtatccgtcagctcgagaagaacgcgatgaagaagctgcgtgaa
tcgatgggtgacatgagcgaaggcttcgctgcctga
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