Halomonas sp. SF2003: C8233_13285
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Entry
C8233_13285 CDS
T05423
Name
(GenBank) dihydrouridine synthase
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haf03016
]
C8233_13285
Transfer RNA biogenesis [BR:
haf03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
C8233_13285
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Gene cluster
GFIT
Motif
Pfam:
Dus
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AVV35573
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All DBs
Position
complement(3183457..3184515)
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AA seq
352 aa
AA seq
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MEGVIDDITRECLTGLGGYDWCVTEFVRVTHVKLPPRVFKRICPELLDASPTQTARTRHE
TPVALQLLGADPEALGINARVAARLGAPSVDINFGCPAKTVNRHDGGAALLRSPERVFRA
VEGVRKALEGTGVPVTAKIRLGFNDRRLALACAQAAAAGGATQLVVHGRTKQEGYRPPAH
WEWIGKITSELSIPVVANGDIWDMHCYWRARSLSGCRDVMLGRAALADPFLAARIKHWQA
TGELLPETDWTQRAQVLLSHAERCAHLPDKVMVPLLKQWMNMMRQSGNAEAESRFQAIKR
HKGRAEFFTGLVAGTALELAPSLLTSVTRMPEPAQTPESPQTSETEAATTPA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgtgatagatgacatcacgcgcgaatgtctcactggccttggcggctacgac
tggtgcgtgacggaattcgtgcgcgtgacccacgtcaagttaccgccgcgcgtcttcaag
cgcatctgtccggagctgctcgacgcctccccgacacagacggcccgtacacgacacgag
accccggtcgccctgcagctgctgggagccgaccccgaggcactgggcatcaatgcccgc
gtcgccgcgcgtctgggtgcgccaagcgtcgatatcaatttcggctgcccggccaagacc
gtcaaccgacatgatggtggcgcggcactgctgcgctcgccggaacgcgtcttccgcgca
gtggaaggcgtgcgcaaggcactcgaggggacgggagtaccggtcaccgccaagattcgt
ctcggcttcaatgatcggcgcctggcgctggcctgcgctcaggcggcagcggcaggcggc
gcgactcagctggtggtacatgggcgtaccaaacaggaaggctatcgcccgccggcgcac
tgggaatggatcggcaagattacctctgagctctccattccggtggttgccaatggcgat
atctgggatatgcactgctactggcgggcgcgctctctgtccggctgtcgcgatgtcatg
ctggggcgtgccgccctggccgaccccttcctggcggcgcgcatcaagcattggcaggcg
accggcgagctgctgcccgagacggactggacacagcgtgcgcaggtgctgctctctcac
gccgaacgctgcgcccacctccccgacaaggtgatggtgccgctgctcaagcagtggatg
aacatgatgcgccagagcggcaacgcggaagccgaaagccgtttccaagccatcaagcgc
cacaaggggcgcgccgagttcttcaccggcctggtggccggcactgcgctggagctggcg
ccgagccttctgacgtcggtgactcgcatgccggagccggctcaaacaccagaatcgcct
cagacatcggaaacggaagcagcgaccaccccggcctga
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