Halomonas sp. SF2003: C8233_13340
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Entry
C8233_13340 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haf03000
]
C8233_13340
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_13340
Enzymes [BR:
haf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
C8233_13340
Transcription factors [BR:
haf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C8233_13340
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
C8233_13340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AVV34502
LinkDB
All DBs
Position
complement(3194228..3195553)
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AA seq
441 aa
AA seq
DB search
MTSVSGEKTVAGMTAPPAAGDTQGCDEAIWQRLLARQPISGEALRYGVITTGIFCRIGCP
SPAPRRDNLRLFADAHAARAAGMRACRRCHPEQSDKPDRPQADKQTRHPVRATPGAPTMP
ESNASHSCASTAARSTPANAASPPASPWPLTVCRQLEQAVAAGEPSPTLASLAAEHGISA
SHLQRRFTTLLGLSPSEYSAGLRQMQFHALLEKGHGVTEAIIAAGYRSSSRAYARRDGIT
PSARRSGGQGEDLLALHWPCRFGIPEQSCWLSAGLSARGVVVIQLSDSREAGQQALEARL
PKANWQQMEADEQDGSGHAASRLLHASLGARLLALCEQPETSHALLLELPLDVRGTAFQL
SVWQQLNATMSGDTLTYRQLAEALERPTASRAVANACGANPLALLTPCHRVVRGDGGLGG
YRWGVPLKQARLAQESGTRRE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagtgtccggcgaaaagacagtggcaggcatgacggcaccacctgccgctggc
gacactcaagggtgcgatgaggccatctggcagcgtctgctggcgcgccagccgatctcc
ggggaggcgctgcgctacggcgtgatcaccactggtatcttctgtcgcatcggctgccca
tccccggcgccacgccgggacaacctgcgcctgtttgccgacgcccacgcggcgcgagcc
gcaggcatgcgcgcctgtcggcgctgtcatcctgagcagtccgacaagcctgatcgccct
caggccgacaagcagactcgccatcccgtcagggccacgcctggagcaccgacgatgccg
gaatcgaacgcctcacattcatgcgcctccactgccgcccgctcgacacctgcgaatgct
gcctcaccccccgcctcgccctggccgctgacggtatgtcggcagctggagcaggccgtc
gccgcaggcgagccctccccgacactcgcaagcctggcggcggagcacgggataagcgcc
tcgcatcttcagcgccgcttcacgacactgctgggcctgtctccttccgagtactcggca
ggtctgcgccagatgcagttccatgcgctgctggagaagggccatggcgtgaccgaggcg
atcatcgccgccggctatcgttccagcagtcgcgcctatgcgcgcagggacggcatcacg
cccagtgcccgtcgctccggcggtcagggagaagacctgctggcactacattggccgtgt
cgcttcgggataccggagcagtcctgctggctgagcgcaggactcagcgcgcgtggcgtg
gtcgtcattcagctcagcgacagtcgtgaggcgggccagcaggcgctggaagcacgtctg
cccaaagccaattggcagcagatggaggcagacgagcaggacggcagcggtcacgcggcc
agtcgcctgctgcatgcctcactgggggcacggttgctcgcgctgtgtgagcaaccggag
accagccatgcgctgctgctcgaactgccgctggatgtgcgtggcaccgcctttcaattg
agcgtctggcagcagctcaacgccaccatgagtggcgatacccttacctaccgccagctg
gccgaggcgctcgagcggccgaccgccagccgcgccgtcgccaatgcctgtggtgccaat
ccgctggctctgctgacgccttgccatcgtgtggtacgcggcgatggcgggcttggcggc
tatcgctggggcgtgccgctcaagcaggctagattggcgcaggagtccggcacccgccgg
gagtga
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