Halomonas sp. SF2003: C8233_13660
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Entry
C8233_13660 CDS
T05423
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_13660
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
C8233_13660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
Zn_ribbon_3
DUF7577
AAA_16
AAA_30
DZR
SLFN-g3_helicase
zf-tcix
DUF3987
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVV34555
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Position
3280062..3281852
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AA seq
596 aa
AA seq
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MFELRPYQQEAVRRTVEHFRRSDEAAVIVLPTGSGKSLVIAELARIARGRVLVLAHVREL
VEQNHAKYESYGKDADIFSAGLKRKQASRQVVFGSVQSVVRNLEAFTPAEPATEGQAAPF
TLLVIDECHRVSLEKDASYRKVINHLREHNPRLKVLGLTATPYRLGQGFIFHRHYHGMVR
GDDDCFFRDCVFEQPLRLMVRQGFLSEPRRVDVAVARYDFSQLAPGIGGSFQEAELNEVV
QGSRATPGIVLDIVAQARERRGVMVFCSTVEHAEEVTALLPDGEAALITGETPGEERERL
INAFKAQQLKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPSKTDCL
ILDYAGNPWDLYAPEVATPKPAGDTEIVQVECPVCGNANLFWGRKDGELVVEHFGRRCQG
LVESPEGEGRPLVQCDFRYRAKACPQCGEANDIAARHCHACQARLVDPDDKLRDALKLRD
ARVLRVSGWQLEEARNGRGLPRLKVTYYDEDGTDLSEWFALETSAQRHAFRLSFLARHLR
APGSDWAPKDIAEVLAGEERLKAPDFVIGRKSGRYWQIRDKLFDYAGRYRTGIAAG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagctgcgtccgtatcagcaggaggccgtgcggcgtaccgtcgagcactttcgc
cgcagtgatgaggcggcggtgatcgtgctgcccaccggcagcggcaagtcactggtgatc
gcggagcttgcgcgtatcgcgcgtggccgtgtgctggtgctggcgcatgtgcgcgagctg
gtcgagcagaaccacgccaagtacgaatcctatggcaaggacgccgacatcttcagtgcc
ggcctcaagcgcaagcaggcctcgcgtcaggtggtgttcggctcggtgcagtcagtggtg
cgcaatcttgaagccttcacgccggctgagccggcgactgaggggcaggcggcgcccttc
acgctgctggtcatcgatgagtgccaccgggtctcgctggagaaggacgccagctatcgc
aaggtcatcaatcatctgcgcgagcacaatccgcgtctcaaggtgctggggctgacggcg
acgccgtatcgtctcggtcagggcttcatcttccatcgtcactatcacggcatggtgcgc
ggggatgatgactgcttcttccgtgattgcgtcttcgagcagccactgcgcctgatggtg
cggcagggctttctgagtgagccgcgtcgcgtcgatgtcgcggtggcgcgctatgacttc
tcgcagctggcacctggcatcggcggcagcttccaggaggcggagctcaacgaggtggtg
cagggctcgcgcgcgacgccgggcatcgtgctggatatcgtcgcccaggcacgcgagcgg
cgcggcgtgatggtgttctgttccaccgtcgagcatgccgaggaagtcaccgcactcctg
cctgacggcgaggcggcgctgatcaccggtgagacccccggcgaggagcgcgagcggctg
atcaatgccttcaaggcccagcagctcaagtatctggtcaatgtggcggtgctcaccacc
ggcttcgatgcgccgcatgtcgatctgatcgccatcctgcgacccaccgaatccgtcagt
ctctatcagcagatcgtcgggcgcggcctgcgtctgagccccagcaagacggactgtctg
attctcgactacgccggcaatccctgggacctctacgcgccggaggtggcgacgccgaaa
ccggccggcgacaccgagatcgtgcaggtcgagtgcccggtatgcggcaacgccaatctg
ttctggggacgcaaggatggcgagctggtggtcgagcacttcgggcgccgctgtcagggt
ctggtcgagtcgccggagggcgagggcaggccgctggtgcagtgcgacttccgctatcgt
gccaaggcctgcccgcagtgtggcgaggccaatgacatcgccgcacgccattgtcatgcc
tgtcaggcgcgactggtcgacccggatgacaagctgcgcgatgcactcaagctgcgtgac
gcacgggtgctgcgcgtcagcggctggcagctggaggaggcgcgcaacgggcgcggcctg
ccacgcttgaaggtgacctattacgacgaggatggcaccgatctgtccgagtggttcgcg
ctcgagacctccgcccagcgccacgccttccgcttgagcttcctcgcgcgtcatctgcgc
gcgccgggcagtgactgggcaccgaaggacatcgccgaggtgctggcgggcgaggagcgt
ctcaaggcgccggacttcgtcatcgggcgcaagagcgggcgttactggcagatccgcgac
aagctgttcgactacgccgggcgctatcgcaccggtatcgccgccggctga
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