Halomonas sp. SF2003: C8233_14090
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Entry
C8233_14090 CDS
T05423
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
haf
Halomonas sp. SF2003
Pathway
haf03060
Protein export
haf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
C8233_14090 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
C8233_14090 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
haf02044
]
C8233_14090 (secD)
Secretion system [BR:
haf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
C8233_14090 (secD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecDF_P1_head
SecD_1st
SecD_SecF_C
Sec_GG
MMPL
ACR_tran
DUF6522
Motif
Other DBs
NCBI-ProteinID:
AVV34624
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Position
complement(3379781..3381631)
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AA seq
616 aa
AA seq
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MLNRYPLWKYLVICLVLAVGVIYALPNLYPEDPAVQISAASGAEAIDQQDLDRATSALEN
AGITPKSGELNGSTGLIRLTSNDQQLRAKELISETLGDDAIVALNLADATPSWLASLGAS
PMKLGLDLRGGVHFQLEVDMDAAVKQRLEVNASAIKETLREERIRYRGSEVDDGTLSLTF
SDEEDRSKARSLISRDFQNFEYDERDVERGAVLDLTLTAAAVKEIQDYAVNQNLTTIRNR
VNELGVSEPLVQRQGPNRIVVELPGVQDTAAAKRVLGATANLEFRLEAASDTPASEMESF
AFRNQPSRTANIMKDVIISGDSVSSASTSFDESGRPQVNINLDGTGGSIMNRVTRAAIGR
NMAVLFIEHKTRTRTVMEDGEKVEKRIPYTEKGLISLATIQSALGNSFRITGLDSPTEAK
ELSLLLRSGSLAAPIYFVQERTIGPSLGAENISRGILSVELGLLLVVLFMLARYKAFGVV
ANVALTANLAILIAAMSMLGATLTLPGIAGIVLTLGMAVDANVLIFERIREEMRSKMPLH
QAVHTGFERAFTSIVDANITTLLVAVILFSIGSGPVKGFAVTLSIGILTSMFTAIMVSRG
IINLAIGGKTLKKLWI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaccgctatccgctttggaagtacctggtgatctgcctggtacttgccgtcggc
gtgatctacgcattgccgaatctctaccccgaagacccggctgtgcagatcagtgccgcc
agcggcgccgaggccatcgaccagcaagacctcgatcgcgccaccagtgccctcgaaaat
gccggcatcacgcccaaatccggggaactcaacggttccaccggcctgattcgccttacc
agcaacgaccagcagctgcgcgccaaggaactgatcagcgagacgctcggcgatgacgcc
atcgtcgcgctgaacctggccgacgccacgccgtcgtggctggccagcctcggtgcctca
ccgatgaagctgggccttgacctgcgtggcggagtccacttccagctggaagtcgacatg
gacgccgcggtcaagcagcgcctggaagtcaacgccagcgccatcaaggaaaccctgcgc
gaggagcgtatccgctaccgcggcagcgaagtcgacgacggtaccctgagcctgacgttc
tccgatgaggaagaccgttcgaaggcgcgctcactgatctcgcgcgacttccagaacttc
gaatacgacgagcgcgatgtcgagcgtggggccgtactggacctcaccctgaccgccgcc
gccgtcaaggagattcaggattacgcggtcaatcagaacctgaccacgatccgcaatcgc
gtcaacgagctgggcgtgtccgagccgctggttcagcgccagggcccgaaccgcatcgtg
gtcgagctgccgggcgtgcaggacacggccgccgccaagcgcgtactgggtgccaccgcc
aacctcgaattccgtctggaagcggccagcgacacgccggccagcgagatggagagcttc
gcgttccgcaaccagccgagccgcaccgccaacatcatgaaggacgtgatcatcagcggt
gacagcgtctccagcgccagcaccagcttcgatgaaagcggccgtccgcaggtcaacatc
aacctggacggaaccggtggctcgatcatgaaccgcgtcacgcgtgccgcgatcggccgc
aacatggcggtgctgttcatcgagcacaagacccgcacgcgcaccgtgatggaagacggc
gagaaggtcgagaagcgcatcccatacaccgagaaggggctgatcagcctggcgacgatc
cagagtgcactgggcaacagcttccgcatcactggcctcgactcgccgacggaagccaag
gagctgtcactgctgctgcgttccggctcactggccgcgccgatctacttcgtgcaggaa
cgcaccatcggcccgagcctcggtgccgagaacatctcgcgcggcatcctgtccgtcgag
ctgggcctgctgctggtcgtgctgttcatgctggcgcgctacaaggccttcggtgtcgtc
gccaacgtggccctgaccgccaacctggcgatcctgattgccgcgatgtcgatgctgggc
gccaccctgaccctgccgggtatcgccggtatcgtgctgacgctgggcatggcggtggat
gccaacgtgctgatcttcgagcgtatccgcgaggaaatgcgctccaagatgccgctgcac
caggccgtgcataccggcttcgagcgcgccttcacctccatcgtcgatgccaacatcacc
accctgctggtcgcggtgatcctgttctccatcggcagtggcccggtcaagggcttcgcg
gtgacgctgtccatcggcatcctgacgtcgatgttcacggcgatcatggtctcgcgcggc
atcatcaatcttgccattggcggcaagacactcaagaaactctggatctga
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