Halomonas sp. SF2003: C8233_14835
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Entry
C8233_14835 CDS
T05423
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03030
DNA replication
haf03430
Mismatch repair
haf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C8233_14835
03430 Mismatch repair
C8233_14835
03440 Homologous recombination
C8233_14835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haf03032
]
C8233_14835
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_14835
Enzymes [BR:
haf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C8233_14835
DNA replication proteins [BR:
haf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C8233_14835
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C8233_14835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_18
AAA_16
AAA_2
AAA_30
AAA_19
TsaE
Mg_chelatase
nSTAND3
AAA_28
PIF1
AAA_24
ABC_tran
Rad17
Motif
Other DBs
NCBI-ProteinID:
AVV34744
LinkDB
All DBs
Position
3595451..3597646
Genome browser
AA seq
731 aa
AA seq
DB search
MSYQVLARKWRPRNFHELIGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCEEGVSSRPCGVCGTCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFTLKNMPP
VRVVEHLSDILAREEVSFEEDALWLLGKAADGSMRDAMSLTDQAIAFGHGQVRREDVAAM
LGTLDHRHVLALLECLASLDAASLLAEVATLAEQGPDYGGVLDDMASVFHRLAIAQMVPS
ALDNGHGDRDALLALASRFTGEDVQLYYQIALQGRGDMANAPDARTALEMTLLRMLAFRP
QGVPRPAQTPLPMTGQAEGANAPGAQASAPVQQAPVQQASVQQAPAQQAPVQEAPVQQAP
VQQAQPQQAPAAPMAPAPQPAAPATEAQPPMADEPPPWATEDVPQDARDAGFRDVAQDAP
QPVSAPAPEQAAAPAQAPAAPSSAMSRLSAAFGSAPAQPEAAESSAPQPAEAVPAAPEAV
EAETSAPAQPEPAVSPSPEPVANEPVVAVQPLPEPAPAPEPAPAVAPTPAPSDSSADGRL
NHAAWLELFPALGLGGITRNIGAHCLVEHDDGTHLKLRLDPAQSAMMAEVHQDRIRKALA
GQGVERVLEISVAPLPEGLETPHSRRIRLLGERHVRAVEALRADPHIQSMEQQLGARLIE
ESVNSFEPDDF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtattggcgcgcaagtggcgcccgcgcaattttcacgaactgatcggt
caggagcatgtcagccgtgcgctggtcaatgccctcgatcaggggcgcctgcaccatgcc
tatctgttcaccgggacccgcggtgtcggcaagacgacgctggcgcgaatcctggccaag
tgcctgaactgtgaagagggcgtcagctcccggccgtgtggcgtgtgtggcacctgtcgc
gagatcgatgagggccgcttcgtcgacctgatcgaagtcgacgccgcctcgcggaccaag
gtcgaggacacgcgtgagctgctggacaacgtccagtacgcgccgacccagggccgctac
aaggtgtacctcatcgatgaggtgcacatgctgtcgacccacagtttcaatgcgctgctc
aagacgctggaagagccgccgccccatgtgaagttcctgctcgcgaccactgatccgcag
aagctgccggtcaccatcctgtcgcgctgcctgcagttcacgctcaagaacatgccgccg
gtgcgcgtggtcgagcacctctccgacattctcgcccgcgaggaagtcagcttcgaggaa
gacgcgctgtggctgctcggcaaggccgctgatgggtcgatgcgtgacgccatgagtctg
accgatcaggcgatcgccttcggccatggccaggtgcggcgcgaagatgtcgccgccatg
ctcggcacgctggatcaccgccatgtgctggcgctgctggagtgtctggcctcgctggac
gccgcgagtctgctggcggaggtcgcgacactggccgagcaggggccggactacggcggg
gtgctggatgacatggcctccgtcttccaccgtctggcgatcgcccagatggtgccgagc
gcactggacaacgggcatggcgaccgtgatgcgctgctggcgctggccagccgcttcacc
ggcgaagacgtgcagctctattaccagatcgccctgcaggggcgtggcgacatggccaac
gccccggatgcgcgcaccgcgctggaaatgacgctgctgcgcatgctggccttccgcccg
cagggcgtgccgcgcccggcgcagacgccgctgccgatgaccggccaggcggagggtgcg
aacgcgcctggcgctcaagcctcggcgcctgtccagcaagcgcctgttcaacaggcttct
gttcagcaagctccggctcagcaggctcctgttcaagaagccccggttcagcaggctcct
gttcagcaggctcagcctcagcaagcaccggcagccccgatggcacccgcgcctcagcct
gccgcgccagcgaccgaagcacagccgccgatggccgacgagccgcccccgtgggcgacg
gaggacgttccgcaggacgcccgggatgccggctttcgcgacgtagcgcaagacgcgccc
cagccagtgtcggcgccagcgccagaacaggcagcagctcccgcacaggcgcccgctgcg
cccagctcggcgatgtcacgcctgagcgccgccttcggttccgcgccggcgcagccagag
gctgctgagtcatcagcgccgcagcctgctgaagccgtaccagcagcgccggaagccgtt
gaagctgaaacatctgcgccagcacagcccgagcccgctgtatcgccgtcgcctgagcct
gtcgcaaacgagccagtcgtggcagtgcaaccgctgccggagcctgctcccgcaccggag
ccggcacccgcggttgctcccacgccggcgccgagcgactcgagtgccgatggtcgcttg
aatcacgccgcgtggctggagctgttccccgcgctgggactgggcggcatcacgcgcaat
atcggcgcgcattgcctggtcgagcacgatgacggcacccacctcaagttgaggctggac
cccgcccagtcggcgatgatggccgaagtccatcaggatcgcattcgcaaggcgctggcg
ggccagggcgtggagcgtgtgctggagatcagcgtcgcgccgctgccggaaggtctggaa
acgccgcacagtcgtcgcattcgtctgctgggtgaacgtcatgtgcgcgcggttgaagcc
ttgcgtgctgacccgcatatccagtccatggagcaacagctgggcgcgcgtctgatcgag
gaaagcgtcaactccttcgagccggacgatttctga
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