Halomonas sp. SF2003: C8233_14940
Help
Entry
C8233_14940 CDS
T05423
Name
(GenBank) DUF2219 domain-containing protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00540
Lipopolysaccharide biosynthesis
haf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C8233_14940
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
C8233_14940
Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
Lipid A
C8233_14940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AVV35613
LinkDB
All DBs
Position
complement(3622598..3623575)
Genome browser
AA seq
325 aa
AA seq
DB search
MALIMLGAVALAPMVEAAEDEGGVLSLKVENDILTSGDDGHYTNGFALSYTFKTPEQHWS
RSFADWVPGFSAARLDATAYRFGQQIYTPNDIKREQPDQDDRPYAGYLFGGVSLFAGEEG
DDWRRVDTFNLDLGIVGPASGAKDAQKAVHKLTGSDEPEGWDHQLHNEPVISTGWQTQLW
LPARAAGLEVEYGPSASVALGNLYTYAGVGGGVRIGQGLTRSYGIPTVAPAQGGRQYFHP
DGDFAWYLFANIEGRAMAYNMLLDGNGFEDSASVDRRPLVGDLQLGFALSWQRWQLAFVN
VWRTHEFETQQESDQFGSLTLSTWL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatcatgctgggcgcggtggcattggcccccatggtggaggcagccgaggac
gagggtggcgtgctgtcattgaaggtcgagaacgacattctcacctccggcgatgatggc
cattacaccaacggctttgcgctgagctacaccttcaagacaccagagcagcactggtca
cgctcattcgcggactgggtgcccggcttcagcgcggcgcgactggacgccacggcctat
cgcttcggacagcagatctatacccccaatgacatcaagcgagagcaaccggatcaggat
gaccgcccctacgcgggctacctgttcggtggcgtctcgctgttcgccggtgaagaggga
gatgactggcgacgggtggataccttcaatctggatctcggcatcgtcggtccggcctcg
ggcgccaaggatgctcagaaggcggtgcacaagctgaccggcagtgatgagccggagggc
tgggatcaccagctacacaacgagccggtgatcagcaccggctggcagacgcagctatgg
ctgccggcgagggccgcaggactggaggtggagtacggcccctcggcttccgtggcgctg
ggcaatctctacacctatgcgggcgtcggtggcggggtacgcatcggccaggggctgacc
cgcagctacgggataccgacagtggcgccggcccagggcggccgtcagtacttccatccc
gacggcgacttcgcctggtacctgttcgccaatatcgagggccgcgcgatggcctacaac
atgctgctggatggcaatggcttcgaggacagcgcctcggtggaccgtcgcccactggtc
ggcgacctgcagctgggcttcgcgctcagctggcaacgctggcagctggcgttcgtcaac
gtgtggcgcactcacgaattcgagacgcagcaggagagcgatcaattcggctcgttgacg
ctctcgacctggctatga
DBGET
integrated database retrieval system
