Halomonas sp. SF2003: C8233_15005
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Entry
C8233_15005 CDS
T05423
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
haf03110
]
C8233_15005 (clpA)
Chaperones and folding catalysts [BR:
haf03110
]
Heat shock proteins
HSP100
C8233_15005 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
TniB
AAA_7
AAA_14
AAA_18
RuvB_N
Mg_chelatase
nSTAND3
AAA_3
IstB_IS21
Zeta_toxin
TsaE
AAA_28
NACHT
AAA_6
TIP49
AAA_33
Torsin
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AVV34774
LinkDB
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Position
3636850..3639114
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AA seq
754 aa
AA seq
DB search
MLSKELELTLNTAFTVARSKRHEFMTVEHLLLALLDNASAADVLRACGANLDKLRVDLQD
FINSTTPLIPEEQEDRETQPTLGFQRVLQRAVFHVQSSGKSEVTGANVLVAIFSEQESQA
VYFLKQQNVARVDAVNYIAHGISKVAGHTQTPQASVENEESEEASSEGGNNPLTNYATNL
NEQARLGKIDPLIGRDGELERVVQILVRRRKNNPLLVGEAGVGKTAIAEGLAKRIVEEDV
PDVIKEAVVYSLDLGALLAGTKYRGDFEKRLKSLLAELRKEPNSILFIDEIHTVIGAGAA
SGGVMDASNLLKPLLSSGELRCIGSTTFQEFRGIFEKDRALARRFQKVDVMEPSVDDTIR
ILKGLRGRFEEHHAIKYTDASLETAVRLADRYINDRQLPDKAIDVIDEAGAHQRLLPESI
RVDTIDTEQVEAIVASIARIPPKTVSSSDKKLLSNLERDLKMLVFGQDDAITGLSAAIKL
SRAGLKAPDKPVGSFLFAGPTGVGKTEVARQLAALMGIELVRFDMSEYMERHTVSRLIGA
PPGYVGYDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGRLTDNNGREADF
RNVILVMTSNAGAEQVARRSIGFKHQDHSTDAMEVIRKTFSPEFRNRLDGIIQFGALDLA
VVRNVVDKFLVELQAQLDEKRVQLDVADEARDLLATLGYDPAMGARPMARVIQEKLKKPL
AEMILFGDLSESGGIVHVTVDNGELHLETEAEMA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcaaagaacttgaactgaccctgaacacggccttcaccgtggcacgttccaaa
cgccacgaattcatgaccgtggaacacctcctgctggcactgctggacaatgcctccgct
gccgatgtcctgcgcgcctgtggtgccaatctggacaagctgcgagtcgaccttcaggac
ttcatcaattccaccaccccgctgattccggaagagcaggaagaccgcgagacgcagccg
acgctgggcttccagcgtgtcctgcagcgtgccgtcttccacgtgcaatcctccggcaag
agtgaagtgaccggcgccaacgtgctggtggccatcttctccgagcaggaaagtcaggcc
gtctacttcctcaagcagcagaatgtcgcgcgtgtggatgcggtcaattacatcgcgcat
ggcatctccaaggtcgcgggtcacactcagacgccccaggcgtcggtcgagaatgaagag
agcgaagaggcgagcagcgaaggcggcaacaatccgctgaccaactacgccaccaacctc
aacgagcaggcgcgtctgggcaagatcgacccgctgatcggccgtgatggcgagctcgag
cgcgtggtgcagattctggtgcgtcgccgcaagaacaacccgctgctggtcggggaggcc
ggtgtcggcaagactgccatcgcggaaggtctcgccaagcgcatcgtcgaggaggacgtg
ccggacgtcatcaaggaagccgtggtctactcgctggatctcggtgcgctgctggccggc
accaagtaccggggtgacttcgagaagcgtctcaagtcgctgctggcggagctgcgcaag
gaaccgaactcgattctgttcatcgacgagatccacaccgtcatcggtgcgggtgccgcg
tccggtggcgtgatggatgcctccaacctgctcaagccgctgctgtcttccggcgagctg
cgttgcatcggttccaccaccttccaggaattccgtggcatcttcgagaaggaccgcgcc
ctggcgcgtcgcttccagaaggtcgatgtcatggagccgtcggtggatgacaccatccgt
atcctcaaggggctgcgtggtcgcttcgaggagcaccatgccatcaagtacaccgatgcc
tcgctggaaacggcagtgcgtctggcggaccgctacatcaacgaccgtcagctgccggac
aaggccatcgacgtgatcgacgaggccggtgcccaccagcgcctgctgccggagagtatc
cgcgtcgataccatcgataccgagcaggtcgaggcgatcgtcgcctccatcgcccgcatt
ccgccgaagacggtctccagctccgacaagaagctgctgtccaatctcgagcgcgatctc
aagatgctggtgttcgggcaggacgacgccatcaccggactgtccgcggcgatcaagctg
tcgcgtgctggcctcaaggcgccggacaagccggtgggcagcttcctattcgctggcccg
acaggcgtcggcaagaccgaggtcgctcgtcagctggcggcgctgatgggcatcgagctg
gtgcgcttcgacatgtccgagtacatggagcgtcacaccgtctcgcgcctcatcggggca
ccgccgggctacgtcggttatgaccagggcggtctgttgaccgaagccatcaccaagcag
cctcactgcgtgctgttgctggatgagatcgagaaggcacacccggaagtcttcaacctg
ctgctgcaggtgatggaccacggccgcctgaccgacaacaacggtcgcgaagcggacttc
cgcaacgtcattctggtgatgacctccaatgcgggtgccgagcaggtggcgcgtcgctcc
atcggcttcaagcaccaggatcactccaccgacgccatggaagtcatccgcaagacgttc
tcgccggaattccgcaaccgtctggatggcatcattcagttcggcgcgctggatctcgcc
gtggtgcgcaatgtggtcgacaagttcctggtcgaactgcaggcgcagctggatgagaag
cgtgtgcagctggatgtcgctgatgaggcgcgcgacttgctggcgactctcgggtatgac
ccggcaatgggtgctcgcccgatggcacgcgtgattcaggagaagctcaagaagccgctg
gcagagatgatcctgttcggcgacctgtccgagtcgggcggcatcgtgcatgtcacggtc
gacaacggcgagctgcacctggaaacggaagcggagatggcgtga
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