Halomonas sp. SF2003: C8233_15220
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Entry
C8233_15220 CDS
T05423
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haf03032
]
C8233_15220
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_15220
Enzymes [BR:
haf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C8233_15220
DNA replication proteins [BR:
haf03032
]
Prokaryotic type
DNA Topoisomerases
C8233_15220
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C8233_15220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVV34809
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Position
3689832..3692609
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AA seq
925 aa
AA seq
DB search
MGEIAREILPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLFAMHELNNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQHFSMRYVLVDGQGNFGSIDGDSAAAM
RYTEVRMARLAHELLADLEKDTVDWVDNYDGTERIPAVLPTKTPNLLVNGSSGIAVGMAT
NIPPHNMGEVIDGCLALIDNGDLTIDELMEFIPGPDFPTAGIINGRAGILDAYRTGRGRI
YVRAVHTIEHNDKNGRDHIIITELPYQVNKARLIEKIAELVKDKKIEGIAELRDESDKDG
LRVVIETKRGESGEVVVNNLFSQTQLETVFGINMVALHEGQPKILNLKQILESFVRHRRE
VVTRRTLFELKKARERGHILEGLAVAISNIDEVIELIKGSPSAAEAKEKLIDREWQPGQV
VEMLERAGATSCRPEDLPEGLGLSEDAKHYRLSPAQAQAILELRLHRLTGLETEKLLAEY
SSILERIAELMEILSSADRLMEVIREELREVRAQYADERRTEIMTSRRDLTIEDLINEED
MVVTVSRSGYAKTQPLSDYQAQKRGGRGKSATSMKDEDVIEHLLVASTHDTVLLFSNKGK
VYWLKVYEMPQASRGSRGKPLVNLIPLDDGEWVTTILPVRDYAADSYIFFATANGTVKRT
ALSQFSRPRSVGLIALDIEEGDRLIGADITSGSDHVMLVSSNGKAIRFEEQNVRVMGRTA
RGVRGMRLLDDAQVISLIIPRTTAIDDNEIEVDDAADATAEGIESADVATTEGATEDSVA
SGEVPQCYILTASANGFGKRTRLEEFPLRGRGGQGVIAMQTSERNGDLVSAVQVSDNDEL
MLITDRGTLVRTRVAEVSTTSRNTQGVTLIRTAEEERLVTTVRVDEPEEVVVVQDELDEE
ALSTDEQVQAGDDAESTDTPPTDAE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatcgccagagagatactgccagtcaacatcgaggacgagctcaagcagtcg
tatctcgattacgcgatgagcgtcatcatcgggcgtgccttgccggatgttcgcgatggc
ctcaaaccggttcaccgtcgcgtactgttcgcgatgcacgagctgaacaatgactggaac
aaggcctacaagaaatctgcccgtgtcgtcggcgatgtgatcggtaaataccacccgcac
ggtgacagtgcggtctacgacaccatcgtccgcatggcccagcacttctccatgcgttat
gtgctggtggatggtcagggcaacttcggttccatcgatggcgacagcgccgcggcgatg
cgttacaccgaggtgcgcatggcgcgcctggcgcacgagctgctggccgacctcgagaag
gacaccgtcgattgggtcgacaactatgacggcaccgagcgcattcctgccgtgctgccg
accaagaccccgaacctgctggtcaatggctcctccggtatcgccgtgggcatggccacc
aacattccgccccacaacatgggcgaggtcatcgacggctgtctggcgctgatcgacaac
ggcgatctgaccatcgatgagctgatggaattcattccggggccggacttcccgaccgcc
ggtatcatcaacggccgtgccggcatccttgatgcctaccgcaccggtcgtggtcgtatc
tacgtgcgtgccgtgcataccatcgagcacaacgacaagaacggccgtgatcacatcatc
atcaccgagcttccctaccaggtgaacaaggcgcgtctgatcgagaagatcgccgaactg
gtcaaggacaagaagatcgagggcatcgccgagctgcgtgacgagtccgacaaggacggt
ctgcgcgtggtcatcgagaccaagcgtggcgagtccggtgaagtggtcgtcaacaacctc
ttctcccagacccagcttgagaccgtgttcggcatcaacatggtcgcgctgcacgaaggt
cagccgaagatcctgaatctcaagcagattctggaatccttcgtgcgtcaccgtcgtgaa
gtcgttacccgtcgtaccctgttcgaactcaagaaggcgcgtgaacgtggccacattctt
gaaggtctggcggtggcgatctcgaacatcgatgaggtgatcgagctgatcaagggctcg
ccgagcgcggcggaagccaaggaaaagctgatcgatcgcgaatggcagccgggtcaggtg
gtcgagatgctcgagcgcgccggtgccacttcctgccgtccggaagatctgccggaaggt
ctgggcctgtctgaagacgccaagcactaccgtctgtcgccggcccaggctcaggccatc
ctcgagctgcgtctgcatcgcctgaccggtctcgagaccgagaagctgctggccgagtac
tcctccatcctcgagcgcatcgccgagctgatggagatcctgtcctctgccgaccgcctg
atggaagtcatccgcgaagagctgcgcgaagtgcgcgcccagtacgcagatgagcgccgc
accgagatcatgaccagccgtcgtgacctgaccatcgaagacctcatcaacgaggaagac
atggtggtgacggtctcgcgcagcggctatgccaagacccagccgctgtctgactaccag
gcccagaagcgtggtggccgcggcaagtccgccacctcgatgaaggacgaggatgtcatc
gagcacctactggtcgcctcgacccacgacaccgtgctgctgttctccaacaagggcaag
gtgtactggctcaaggtctacgagatgccgcaggcgtcacgtggctcgcgcggcaagccg
ctggtcaacctgattccgctggacgacggcgagtgggtcaccaccatcctgccggtgcgc
gattacgccgccgacagctacatcttcttcgccaccgccaacggcacggtcaagcgcacc
gcgctgagccagttctcgcgtccgcgcagtgtcggtctgatcgcgctggacatcgaggaa
ggtgaccgtctgatcggtgccgacatcacgtccggctccgaccacgtcatgctggtgtcc
tccaacggcaaggcgatccgcttcgaagagcagaacgtgcgcgtgatgggccgtaccgcc
cgtggtgtacgcggcatgcgtctgctcgacgatgcacaggtcatcagtctgatcattccg
cgcaccaccgcgatcgatgacaacgagatcgaggtcgatgacgccgcggatgcgacggca
gaaggcatcgagagcgctgatgtggcgaccaccgagggcgcgacggaagacagtgtcgcc
agcggtgaggtgccgcagtgctacatcctgaccgcgtccgccaatggcttcggcaagcgc
acgcgtctggaagagttcccgctgcgtggccgtggtggccagggcgtgatcgcgatgcag
accagcgagcgcaacggtgatctggtcagcgcggtgcaggtcagcgacaacgatgaactg
atgctgatcaccgaccgcggcaccctggtacgtacccgcgtcgccgaggtgtccaccacc
tcgcgcaacacccagggcgtgaccttgatccgcaccgcggaagaggagcgtctggtcacg
acggtgcgtgtcgacgagccggaagaggtcgtcgtggtgcaggatgagctggacgaagag
gcgctgagcaccgacgaacaggtgcaggcgggagatgacgccgagtcgacggataccccg
ccgacagacgcggaataa
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