Halomonas sp. SF2003: C8233_15285
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Entry
C8233_15285 CDS
T05423
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
C8233_15285
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
HHH_6
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AVV34821
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Position
3707441..3709864
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AA seq
807 aa
AA seq
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MDATATDATTSRPAPTLSPAATTRRIQQALAGELGVREEQITATVELLDGGATVPFISRY
RKEATGGLDDTQMRQLEERLRYLRELEERRQVVLESIAEQNKLSATLERDVLAADSKQRL
EDLYLPYRKKRRTKAQIAREAGLEPLADALLADPTLEPEAQAAGFVAADKDVADTKAALD
GAKQILMERFAEDAALVGRLRQRLWDDGILSARVMKGKEQEGAKFSDYFEHDEPLHKAPS
HRALAMLRGRNEGVLSLALKLEGEDDLPRHPMEGAIAAHFSIEDQGRVADRWLKEVVRWT
WRVKLYTHLESELIGRLRERAEQEAIQVFADNLKDLLLAAPAGPKATLGLDPGLRTGVKV
AVVDATGKYVDQATIYPHAPHNRWDASVAELVKLVERHDVELIAIGNGTASRETDKLAAD
VLTRLSGRRLQKVMVNEAGASIYSASEYAAREFPDLDVTIRGAVSIARRLQDPLGELVKI
EPKSIGVGQYQHDVSQVQLGRSLEAVVEDCVNGVGVDLNMASSALLSRVAGLNTTLAENI
VAHRDANGRFASRQELLKVSRLGPRTFEQCAGFLRIASGKNPLDASAVHPEAYPLVERIA
KAHGRDLPSLLGDSAFLRTVKPTEFTDEHFGLPTVTDILRELDKPGRDPRPEFRFAEFKE
GVETLKDLEPGMKLEGVVTNVTHFGAFVDIGVHQDGLVHISALSQKYVADPREVVKAGDI
VSVKVMEVDIPRARIALSMRMSDTPAEKGAAGEARRGAEGGRGGRSQGGGGRQERGGRGS
NSGASGGAAPANNAMAAALLNARKSKS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggacgctactgcaactgacgctaccacttcccgtcctgcaccgacgctgtcgcccgct
gccaccactcgccgtatccaacaggcgctggccggtgagcttggggtgcgcgaagaacag
atcaccgccaccgtcgagctgctggatggcggcgcgaccgtgccgttcatctcgcgctac
cgcaaggaagccaccggcgggctcgatgacacccagatgcgtcagctcgaagagcgcctg
cgctatctgcgtgagctggaggagcggcgtcaggtagtgctcgagtcgatcgccgagcag
aacaagctgagcgccacgcttgagcgggatgtgctggccgccgacagcaagcagcgtctg
gaagatctctatctgccgtatcgcaagaagcgccgtaccaaggcccagatcgcgcgtgaa
gcggggcttgagcctctggccgatgcgctgctcgcggacccgacgctggagccggaggct
caggcggctggcttcgtcgctgccgacaaggacgttgctgataccaaggcggcgctggat
ggcgccaagcagattctgatggagcgcttcgcggaggacgccgcgctggtcggtcgcctg
cgtcaacgtctgtgggacgacggcatcctcagtgcgcgcgtcatgaagggcaaggagcag
gagggcgccaagttctccgattacttcgagcatgacgagccgctgcacaaggcgccctcg
caccgtgcgctggccatgctgcgtggtcgcaacgaaggcgtgctgagcctcgcgctcaag
ctcgaaggcgaagacgacctgccgcgtcacccgatggaaggcgccatcgcggcgcatttc
tccatcgaggatcaagggcgcgtcgcggaccgctggttgaaggaagtggtgcgctggacc
tggcgcgtcaagctctatacccatctggagagcgagctgatcggccgcctgcgcgagcgc
gccgagcaggaggccatccaggtcttcgccgataacctgaaggacctgctgctggcggcg
ccggcgggccccaaggccacgctggggctggacccggggctgcgtaccggcgtcaaggtc
gcggtggtggatgccaccggcaagtatgtcgatcaggccaccatctatccgcatgcgcca
cacaatcgctgggacgcctcggtggccgagctggtcaagctggtcgagcggcatgacgtc
gagctgatcgccatcggcaacggcaccgcctcgcgcgagaccgacaagctggccgccgac
gtgctgacgcgcctgtccggccgtcgcctgcagaaggtgatggtcaacgaggccggcgcg
tccatctactccgcctcggaatatgcggcgcgtgaattccctgacctggacgtgaccatc
cgcggcgcggtctccatcgcccgccgcctgcaggacccgctgggtgagctggtcaagatc
gagcccaagtccatcggcgttggtcagtaccagcacgatgtcagtcaggtgcagctgggg
cgcagtctggaagccgtcgtcgaggattgcgtcaacggtgtcggcgtcgacctcaacatg
gcctcaagcgcgctgctgtcacgcgtcgccggtctcaacaccacgcttgccgagaatatc
gtcgcgcaccgggatgccaatggccgtttcgcctcgcgtcaggaattgctcaaggtcagc
cggctgggtccgcgcactttcgagcagtgtgccggctttttgcgcatcgcctccggcaag
aatccgctggatgccagtgccgtccacccggaggcctatccgctggtcgagcgcatcgcc
aaggcgcacgggcgtgatctgccgagtctgctgggtgacagcgccttcctgcgcaccgtg
aagccgacggaattcaccgatgagcacttcggcctgccgacggtgaccgatatcctgcgt
gagctggacaagccgggacgcgacccgcgccccgaattccgcttcgccgagttcaaggaa
ggggtcgagaccctcaaggacctcgagccgggcatgaagcttgagggcgtcgtcaccaac
gtgactcattttggagccttcgtggacatcggcgtgcatcaggacggcctggtacacatc
tctgccctgtcgcaaaagtatgttgctgacccgcgcgaggtggtcaaggcgggcgatatc
gtcagcgtcaaggtgatggaagtcgacatcccgcgcgcgcgcatcgcgctgagcatgcgc
atgagcgatactcccgccgagaaaggcgcggcaggcgaggcgcgacgcggcgcagagggt
ggtcgcggtggtcgctcgcaaggtggcggtggccgtcaggagcgcggtggtcgcggcagc
aattctggcgcgagcggcggcgcggcaccggccaacaatgcgatggcagcagcactgctc
aatgcgcgcaagtcgaaatcataa
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