Halomonas sp. SF2003: C8233_15645
Help
Entry
C8233_15645 CDS
T05423
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00260
Glycine, serine and threonine metabolism
haf00460
Cyanoamino acid metabolism
haf00630
Glyoxylate and dicarboxylate metabolism
haf00670
One carbon pool by folate
haf00680
Methane metabolism
haf01100
Metabolic pathways
haf01110
Biosynthesis of secondary metabolites
haf01120
Microbial metabolism in diverse environments
haf01200
Carbon metabolism
haf01230
Biosynthesis of amino acids
haf01240
Biosynthesis of cofactors
haf04981
Folate transport and metabolism
Module
haf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C8233_15645 (glyA)
09102 Energy metabolism
00680 Methane metabolism
C8233_15645 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C8233_15645 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
C8233_15645 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C8233_15645 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
C8233_15645 (glyA)
Enzymes [BR:
haf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
C8233_15645 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DUF3863
Motif
Other DBs
NCBI-ProteinID:
AVV34880
LinkDB
All DBs
Position
3792856..3794118
Genome browser
AA seq
420 aa
AA seq
DB search
MFTRDMQIAGFDDALLSAMDDEVVRQEAHIELIASENYASPRVIQAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVEQLAIDRACELFGATYANVQPHAGSQANSAVFQALVSPGDTILGMS
LDAGGHLTHGARPNFSGKHYNAVQYGLGENGLIDYAEVARLAREHKPKMIIAGFSAYSQI
IDWAEFRKIADEVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGLIL
SAEGNADIEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMDPAFTTYQKQVVKNAKAMAS
VFLERGFEVVSGGTEDHLFLLSLVKQGLTGKDADAALGRAHITVNKNAVPGDPQSPFVTS
GLRIGTPAVTTRGFQEQECLELAGWICDILDAMVAGDSAAAEAEVQAKVSAVCARLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccgtgacatgcagattgccggttttgatgatgcgctcctgagcgccatggac
gacgaagtcgttcgccaggaagctcacatcgagctgatcgcctccgagaactacgccagc
ccccgcgtcatccaggcgcaaggctcccagctgaccaacaagtacgcggaaggctacccg
ggcaagcgttactacggcggttgcgagttcgtcgacaaggtcgagcagctggccatcgat
cgtgcctgcgaactgttcggtgctacctacgccaacgttcagccgcacgccggttcccag
gccaacagtgccgtcttccaggcgctggtctcgccgggcgacaccattctgggcatgagc
ctggacgcggggggtcacctgactcacggtgcacgtccgaacttctccggcaagcactac
aacgccgtgcagtacggtctgggcgagaacggcctgatcgactacgccgaagtcgcgcgt
ctggcgcgtgagcacaagccgaagatgatcatcgccggcttctccgcctactcccagatc
atcgactgggccgagttccgcaagatcgccgacgaagtgggtgcctacctgctggtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgagcccgctgccccacgcc
cacgtcgtcaccaccaccacgcacaagaccctgcgcggtccgcgtggcggcctgatcctg
tccgccgaaggcaatgccgacatcgagaagaagctgaactccgctgtcttcccgggtggc
cagggcggcccgctgatgcacgtcatcgcggccaaggcagtgtgcttcaaggaagcgatg
gacccggccttcaccacttaccagaagcaagtggtcaagaacgccaaggccatggcgtcc
gtgttcctggagcgcggcttcgaagtcgtctccggcggcaccgaagaccacctgttcctg
ctgtctctggtcaagcagggcctgaccggcaaggacgctgacgctgcgctgggccgtgcc
cacatcaccgtcaacaagaacgccgtaccgggtgacccgcagtcgccgttcgtcacctcc
ggtctgcgtatcggtaccccggccgtcaccacgcgtggcttccaggagcaggagtgtctg
gaactggccggctggatctgcgatatcctcgatgcgatggtcgccggcgattccgccgct
gccgaagccgaggtgcaggccaaggtctccgccgtctgtgcacgtctgccggtctacgcc
tga
DBGET
integrated database retrieval system