KEGG   Halomonas sp. SF2003: C8233_15645
Entry
C8233_15645       CDS       T05423                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
haf  Halomonas sp. SF2003
Pathway
haf00260  Glycine, serine and threonine metabolism
haf00460  Cyanoamino acid metabolism
haf00630  Glyoxylate and dicarboxylate metabolism
haf00670  One carbon pool by folate
haf00680  Methane metabolism
haf01100  Metabolic pathways
haf01110  Biosynthesis of secondary metabolites
haf01120  Microbial metabolism in diverse environments
haf01200  Carbon metabolism
haf01230  Biosynthesis of amino acids
haf01240  Biosynthesis of cofactors
haf04981  Folate transport and metabolism
Module
haf_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:haf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    C8233_15645 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    C8233_15645 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    C8233_15645 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    C8233_15645 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    C8233_15645 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    C8233_15645 (glyA)
Enzymes [BR:haf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     C8233_15645 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DUF3863
Other DBs
NCBI-ProteinID: AVV34880
LinkDB
Position
3792856..3794118
AA seq 420 aa
MFTRDMQIAGFDDALLSAMDDEVVRQEAHIELIASENYASPRVIQAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVEQLAIDRACELFGATYANVQPHAGSQANSAVFQALVSPGDTILGMS
LDAGGHLTHGARPNFSGKHYNAVQYGLGENGLIDYAEVARLAREHKPKMIIAGFSAYSQI
IDWAEFRKIADEVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGLIL
SAEGNADIEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMDPAFTTYQKQVVKNAKAMAS
VFLERGFEVVSGGTEDHLFLLSLVKQGLTGKDADAALGRAHITVNKNAVPGDPQSPFVTS
GLRIGTPAVTTRGFQEQECLELAGWICDILDAMVAGDSAAAEAEVQAKVSAVCARLPVYA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgttcacccgtgacatgcagattgccggttttgatgatgcgctcctgagcgccatggac
gacgaagtcgttcgccaggaagctcacatcgagctgatcgcctccgagaactacgccagc
ccccgcgtcatccaggcgcaaggctcccagctgaccaacaagtacgcggaaggctacccg
ggcaagcgttactacggcggttgcgagttcgtcgacaaggtcgagcagctggccatcgat
cgtgcctgcgaactgttcggtgctacctacgccaacgttcagccgcacgccggttcccag
gccaacagtgccgtcttccaggcgctggtctcgccgggcgacaccattctgggcatgagc
ctggacgcggggggtcacctgactcacggtgcacgtccgaacttctccggcaagcactac
aacgccgtgcagtacggtctgggcgagaacggcctgatcgactacgccgaagtcgcgcgt
ctggcgcgtgagcacaagccgaagatgatcatcgccggcttctccgcctactcccagatc
atcgactgggccgagttccgcaagatcgccgacgaagtgggtgcctacctgctggtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgagcccgctgccccacgcc
cacgtcgtcaccaccaccacgcacaagaccctgcgcggtccgcgtggcggcctgatcctg
tccgccgaaggcaatgccgacatcgagaagaagctgaactccgctgtcttcccgggtggc
cagggcggcccgctgatgcacgtcatcgcggccaaggcagtgtgcttcaaggaagcgatg
gacccggccttcaccacttaccagaagcaagtggtcaagaacgccaaggccatggcgtcc
gtgttcctggagcgcggcttcgaagtcgtctccggcggcaccgaagaccacctgttcctg
ctgtctctggtcaagcagggcctgaccggcaaggacgctgacgctgcgctgggccgtgcc
cacatcaccgtcaacaagaacgccgtaccgggtgacccgcagtcgccgttcgtcacctcc
ggtctgcgtatcggtaccccggccgtcaccacgcgtggcttccaggagcaggagtgtctg
gaactggccggctggatctgcgatatcctcgatgcgatggtcgccggcgattccgccgct
gccgaagccgaggtgcaggccaaggtctccgccgtctgtgcacgtctgccggtctacgcc
tga

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