Halomonas sp. SF2003: C8233_16280
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Entry
C8233_16280 CDS
T05423
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haf03032
]
C8233_16280
03036 Chromosome and associated proteins [BR:
haf03036
]
C8233_16280
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_16280
DNA replication proteins [BR:
haf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C8233_16280
Chromosome and associated proteins [BR:
haf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C8233_16280
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C8233_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Barstar
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVV34978
LinkDB
All DBs
Position
3943029..3943301
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEAIAASADIPKAAASRALDAMVDTVTDSLKKGETVALVGFGTFIVKERAARTG
RNPQTGAPIEISAAKVPSFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatccgagctgatcgaagccattgctgcatctgccgatattccgaaagcagca
gctagccgtgcactcgatgcgatggtcgacaccgtcactgatagcctgaagaagggtgag
accgtggcactggtcgggttcggcacctttattgtcaaggaacgtgctgcacgtactggc
cgtaacccgcagactggcgctccgatcgagatcagtgctgccaaggtgccgagcttcaag
gctggcaaggcactgaaagacgccgtcaactga
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