Halomonas sp. SF2003: C8233_16470
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Entry
C8233_16470 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00540
Lipopolysaccharide biosynthesis
haf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C8233_16470
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
C8233_16470
Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
Core region
C8233_16470
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_4_4
Glyco_trans_1_2
DUF4127
Motif
Other DBs
NCBI-ProteinID:
AVV35014
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Position
3990729..3991862
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AA seq
377 aa
AA seq
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MSTGAGKLAAIAIRQVEKNTGASRNAFEQADALRALGYRVVILAERGKPELARAHGAELV
RLWRWPFKGAYRRFWFNRRVQAWASRHAPDLLISHGDCESPDTVYLHNCVHLASQCIHGR
ELPRDHEVAAIHDHVLKGGKFRQVAVNSRMMGEDLMARYGIAPERIEISYPGYDPVQFTV
ERARAGRTAQREALGVAEDELLVGLVSSGNFTKRNVAGFVAMAALMEQASPGRYRFLVVG
KDDAAPYQQQAKEAGIAERMIWRSTIPEVETLYGALDLFVMPAHIEEFGRVALEAMACGA
PVLLNARVGSAELLDDYPELVMAAESTPQQWAERSTHLLESDTQALSAALASLACNYSHQ
AQNLKLKASFEALMAGR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactggtgcaggcaagctggccgcgatcgccattcgtcaggtcgagaagaacacc
ggtgccagccgcaatgccttcgagcaggcggatgcgttgcgcgcactgggctatcgcgtg
gtgattctcgccgagcgcggcaagcctgaactggctcgcgcccacggcgcggagctggtg
cgcctgtggcggtggcccttcaagggggcgtatcgacgtttctggttcaatcgccgtgtc
caggcctgggccagccgtcatgcgcccgacctgctgatcagtcatggtgactgcgaaagc
ccggataccgtctatctgcacaattgcgtgcaccttgcctcgcagtgcatccatggccgt
gagctgcctcgcgaccacgaagtggcggcgattcatgatcacgtgctcaagggtggcaag
ttccggcaggtggcggtcaattcgcgcatgatgggagaggatctgatggcgcgctacggt
atcgcgcctgagcggatcgagatcagctacccgggctatgacccggtgcaattcacggtc
gagcgcgcgcgcgcagggcgcaccgcccagcgtgaggcattgggcgtggccgaggatgag
ctgctggtcggtctggtgtcatccggcaacttcaccaagcgcaacgtggctgggttcgtg
gcgatggcggcgctgatggagcaggcctcaccgggccgctatcgcttcctggtggtaggc
aaggatgatgccgcgccttaccagcagcaggccaaggaggcgggcatcgccgagcgcatg
atctggcgctcgaccattcccgaggtcgagacgctctatggtgcgctggacctgttcgtg
atgccggcccatatcgaggagttcgggcgtgtcgcgctggaggcgatggcctgtggtgcg
ccggtgctgctcaatgcgcgggtcggctcggccgagttgctcgatgactaccctgaactg
gtcatggcggcagagtccacgccacagcagtgggccgagcgcagcacccatctgctcgag
agcgatacgcaggcgctgagcgctgcgctggccagtctggcatgcaattactcgcatcag
gcgcagaatctcaagctcaaggccagcttcgaggccttgatggcggggcggtga
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