Halomonas sp. SF2003: C8233_16555
Help
Entry
C8233_16555 CDS
T05423
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haf03032
]
C8233_16555
03036 Chromosome and associated proteins [BR:
haf03036
]
C8233_16555
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_16555
DNA replication proteins [BR:
haf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C8233_16555
Chromosome and associated proteins [BR:
haf03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
C8233_16555
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
C8233_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AVV35031
LinkDB
All DBs
Position
complement(4008582..4008878)
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSLKDVEAAVRIILDDVTDALAHGGRVEIRGFGSFSLHYREPRL
GRNPKTGEPVDLDGKFVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgagctgatcgaacagatagccatgcgacagcctgagttgtcgctcaag
gatgtagaggccgcggttcgcatcatcctcgatgatgtgacagacgccctggcccacggc
ggtcgcgtcgagattcgcggtttcggcagcttctcgctgcactatcgtgagccacgactg
gggcgcaaccccaagaccggtgagccggtggacctggatggcaagttcgtcccccacttc
aagcccggcaaggagctgcgcgagcaggtcgatgccagtcgcgccctggggtattga
DBGET
integrated database retrieval system
