Halomonas sp. SF2003: C8233_16675
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Entry
C8233_16675 CDS
T05423
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C8233_16675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_16675
Enzymes [BR:
haf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C8233_16675
DNA repair and recombination proteins [BR:
haf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C8233_16675
Prokaryotic type
C8233_16675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVV35049
LinkDB
All DBs
Position
4032171..4032890
Genome browser
AA seq
239 aa
AA seq
DB search
MPLETAATGRSEVLPADWQAHLGQEFQADYMQRLRDFLRAEKDAGKVIYPHSDDWFRAFW
LTPLSNVKVVILGQDPYHGPGQAHGLCFSVRPGVRPPPSLKNIYKELATDVGVEPVDHGF
LESWAKQGVLLLNSVLTVEQGKAASHQKQGWEQFADRAIDVINQHCEGVVFLLWGSHAQK
KARAVDAQKHLVLHAPHPSPLAAHRGFFGSRHFSQANAWLEARGKKPIDWQLPLLNDRV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgccgttggagactgccgcgactggccgctccgaggtgctgcctgccgattggcaggcg
catcttggccaagagtttcaggctgactacatgcagcgtctgcgcgactttctgcgcgcc
gagaaagatgccggcaaggtcatctatccgcattccgatgactggttccgtgccttctgg
ctgacgccgctctccaacgtcaaggtcgtgatcctcgggcaggacccgtatcacggcccg
ggccaggcgcacggactgtgtttctcggtacgccccggtgtgcgcccgccgccttcgctg
aagaacatctacaaggaactggctaccgatgtcggcgtcgaacccgtcgatcacggcttc
ctggaaagctgggcgaagcagggcgtcttgctactcaacagcgtgctgaccgtcgagcag
ggaaaggccgcctcgcatcagaagcaggggtgggagcaattcgccgaccgcgccatcgac
gtgatcaaccagcactgtgagggtgtcgtcttcctgctctggggcagtcatgcccagaag
aaggcccgcgctgtggacgcccagaagcacctggtgctccacgcgccgcacccatccccc
ctcgcagcgcaccgcggtttcttcggctctcgccacttctcgcaagccaacgcctggctg
gaagcgcgtgggaaaaagccgatcgactggcagttgccgctgcttaatgaccgagtgtga
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