Halomonas sp. SF2003: C8233_16715
Help
Entry
C8233_16715 CDS
T05423
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
haf
Halomonas sp. SF2003
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA
HTH_30
HTH_29
HTH_28
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AVV35056
LinkDB
All DBs
Position
complement(4041753..4043330)
Genome browser
AA seq
525 aa
AA seq
DB search
MTAHAPSTPRETRRSGSDPLPTASVLIVDDEPGMRRYLEKALSSRFALIECADSVEQAEA
LRSRLHFDLILLDIRLPGRDGLDWDEALAPSSVSDVIFMTAYADLETAVRALRAGACDFI
IKPFRLEQLQAALDRCLERRQLTRENFLLRRDNARHQQEEASLKGESPAMQELGHIIARV
APAPSPVLILGESGTGKELAARDLHRLSGRRGAFVPVNCGAISPELLESELFGHLKGAFT
GAHRGRDGLFSFADGGTLFLDEIGEMPLAMQAKLLRVLETRRVRPVGGEQEQAVDVRIVA
ATHRTLETEVAAGRFREDLYYRLNVLSLTLPALRERPEDIPALAQHFSRQLSRELNLPAV
PWQHSDLTRLCHYSWPGNVRELKNVIERALLLGRLPGDTLPVDSQAEQASSHPAWDDSGD
ATTSTEEEATSSGYPLEWSLDAVEKAHLCAVLERHTNNKSAAARQLGISRKTLDRKLTTW
RAEQQISEDSGTESGTEIGTESGAESDQPAPATSSAAPYGADGSA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccacgccccctccacaccccgtgagacccggcgtagcggcagcgaccccctc
cccaccgcctcggtactgatcgtcgatgacgagcccggcatgcgccgctatctggagaag
gcactgtcctcgcgcttcgcgctgatcgaatgtgccgacagtgtcgagcaggccgaagcc
ctgcgctcgcgcctgcatttcgacctcatcctgctcgacattcgcctgccggggcgtgat
ggcctggattgggatgaggcgcttgcgccctcttcggtcagcgatgtcatcttcatgacg
gcctacgccgatctcgagaccgctgtgcgcgcactgcgggccggggcctgtgatttcatc
atcaagccgtttcgtctcgagcagttgcaggccgcgctggaccgctgccttgagcgccgc
cagctgacgcgggaaaacttcctgctccgtcgcgacaatgcccgccatcaacaggaagag
gccagcctcaagggcgagagccctgccatgcaggaactggggcatatcatcgcgcgcgtt
gcccctgcgccctcaccggtgctgatcctgggggagtccggcaccggcaaggagttggcg
gcgcgtgacctgcatcgcctgtccggtcggcgcggcgccttcgtgccggtcaactgcggt
gccatcagcccggagctgttggagagcgagctgttcggccatctcaagggggccttcacc
ggcgcgcaccgtggccgtgatggcctgttcagcttcgccgatggcggcacgctgttcctg
gatgaaatcggcgagatgccattggcaatgcaggccaagctgttgcgagtgctggagact
cgccgcgtgcgccccgtcggcggcgagcaggaacaggcggtggacgtgcgtatcgtggcc
gccactcaccgcacgctggagacggaggtggccgcgggccgcttccgcgaagacctctac
tatcgcctcaacgtgctgagcctgacactgcctgccctgcgcgagcgcccggaagacatc
ccggcgctggcccagcatttctcgcgccaactgtcgcgtgagctcaacctccccgccgtg
ccctggcagcattctgatctcactcgcctgtgccactattcctggcccggcaatgtgcgg
gaactcaagaacgtcatcgagcgcgccttgctgctcggccgcctgcccggcgataccctg
ccggtcgacagtcaggccgaacaggcatcaagccacccggcatgggatgacagcggagac
gcgaccacctccaccgaggaagaggccaccagcagcggctatccactcgagtggtcattg
gatgcggtggaaaaggcccatctatgcgcggtactggagcgacataccaacaacaagtcc
gccgccgcccgccagctgggcatctcgcgcaagacgctggatcgcaaactgaccacctgg
cgcgccgagcagcaaatcagtgaggacagcggcactgagagtggtactgagattggtact
gagagcggcgccgagagcgatcaacccgcccccgccacctcgtccgccgctccctacgga
gccgacggcagcgcatga
DBGET
integrated database retrieval system
