Halomonas sp. SF2003: C8233_16765
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Entry
C8233_16765 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K03746
DNA-binding protein H-NS
Organism
haf
Halomonas sp. SF2003
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haf03036
]
C8233_16765
03400 DNA repair and recombination proteins [BR:
haf03400
]
C8233_16765
Chromosome and associated proteins [BR:
haf03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
C8233_16765
DNA repair and recombination proteins [BR:
haf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C8233_16765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
DUF6374
Utp13
DUF6353
Urocanase
polyprenyl_synt
CR6_interact
SPT2_N
GCIP_C
DUF4815
AT_hook
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
AVV35065
LinkDB
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Position
4052815..4053099
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AA seq
94 aa
AA seq
DB search
MTADSLEKIARNKNVARAAARQLSMEQLHKLSEVINEVIEQKAEEDEQRREEEIAKERKL
AEIRDAMIEAGLSVDDLVSDQPKRRGRPPKNKSV
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgattctctcgaaaagatcgctcgtaacaagaatgttgctcgtgcagcagcg
cgtcagctgtccatggaacaactgcacaagctctccgaggtcatcaatgaggtgatcgag
cagaaagccgaagaagacgagcagcgccgcgaagaagaaatcgccaaggagcgcaagctt
gccgagattcgtgatgcgatgatcgaagctggcctttccgtggatgatctggtcagtgat
cagcccaagcgtcgtggccgtccgccgaagaacaagtccgtttga
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