Halomonas sp. SF2003: C8233_17095
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Entry
C8233_17095 CDS
T05423
Name
(GenBank) hypothetical protein
KO
K16710
colanic acid/amylovoran biosynthesis protein WcaK/AmsJ
Organism
haf
Halomonas sp. SF2003
Pathway
haf00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
C8233_17095
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Gene cluster
GFIT
Motif
Pfam:
PS_pyruv_trans
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AVV35116
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Position
4131919..4133538
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AA seq
539 aa
AA seq
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MTAMPGMQTQPSGIARSNRDITDIRTNSMAKICMTHGWHDDNKGDSAILMGTIDFLDQLI
DAEQGRSDVSGAGVAKAEGHRIDILPIDDQVFATERGPFRHIRRRYRERVTVGQPLMPPM
RDKLRFVTSLLGLGAKMMFGKQGKSGNDIIDAADLVVVKGGHIFHNGSFKKTLSSWLALI
GYLAPVMLARKAGKRVLLLGHSFGPFKTPAQERFFLRTLSDCLVVSREEITHAMTQKADP
KLPHALLGTDMAFAMAPRASDEHAAVKAPNGVASPYAVITLRDWWGLDQQAFAERVEVLS
RSLLESRERLGIERLLVVPHVLGPTDIENDQRISQLVFDHLQKALATAGGEDLATRVELV
QGDPSPDALVDLYRDAQFLVGTRFHSVIFALMSGTPVYALSYCGPKAPGIMRDFGLGDSV
QDIENFDPARIVADIEQLVADKAFPALAEKVIAEKLAITADITRDFLRRAPGRAGVWGQR
ELKLNDAAFPAPVATATTAAPVNSAPADAAAADTMAADAPAGDNSATAAHDSEPVVRGA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgatgccgggcatgcagacacagccctcaggcatcgcgcgttcgaatcgcgac
attacggacataaggacgaacagcatggccaagatatgcatgacgcacggatggcatgac
gacaacaagggcgactccgccatcctgatgggcaccatcgacttcctcgatcagctgatc
gatgccgaacagggccgcagcgatgtctccggcgccggcgtggccaaggccgaaggccac
cgcatcgacatcctgcccatcgatgatcaggtgttcgccaccgagcgcggcccgttccgc
catattcgtcgtcgctaccgtgaacgcgtcaccgtcggccagccgctgatgccgccgatg
cgtgacaagctgcgcttcgtgacctcgctgctcggcctgggcgccaagatgatgttcggc
aagcagggcaagagtggcaacgacatcatcgacgccgcggacctggtggttgtcaagggc
ggtcatatcttccacaacggcagcttcaagaagacgctgtcctcgtggctggcgctgatc
ggctatctggcgccggtgatgctggcccgcaaggctggcaagcgcgtcttgctgctgggt
cactccttcggcccgttcaagaccccggcccaggagcgcttcttcctgcgcaccctgagc
gattgcctggtggtctcgcgtgaggaaatcactcacgccatgacccagaaggccgacccg
aagctgccgcacgccctgctgggcaccgacatggccttcgccatggccccgcgtgccagc
gacgagcatgctgcggtcaaggcgccgaatggcgtggcctcgccgtacgccgtgatcacc
ctgcgcgactggtgggggctggatcagcaagccttcgccgagcgtgtcgaggtgctgtcg
cgctcactgctggaatcccgcgagcgtctgggcatcgagcgcctgctggtggtaccgcac
gtgctgggcccgaccgatatcgagaatgaccagcgcatctcccagctggtgttcgatcat
ctgcagaaggccttggccacggcgggtggggaagacctcgccacgcgtgtcgagctggtg
cagggcgacccgagcccggatgcgctggtcgatctctatcgcgatgcccagttcctggtc
ggcacccgcttccactcggtcatcttcgcgctgatgtccggtacaccggtctacgcgctg
tcctactgcggtcccaaggcgccgggcatcatgcgtgacttcggtctcggcgacagcgtg
caggacatcgagaacttcgacccggcacgcatcgtggccgatattgaacagctggtcgcc
gacaaggccttcccggcgctggccgagaaggtcatcgccgagaagctggcgatcaccgcc
gacatcacgcgtgatttcctgcgccgtgcaccggggcgtgccggcgtctgggggcagcgt
gagctgaagctcaatgacgctgccttcccggcaccggtggccactgccaccactgctgcg
ccagtcaattctgcgccggccgatgccgcagcggccgataccatggccgcggatgcgcct
gccggcgacaacagcgcgactgccgctcacgacagcgagcctgtcgtgcgaggagcctga
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