Halomonas sp. SF2003: C8233_17840
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Entry
C8233_17840 CDS
T05423
Name
(GenBank) ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00540
Lipopolysaccharide biosynthesis
haf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C8233_17840
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
C8233_17840
Enzymes [BR:
haf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
C8233_17840
Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
Core region
C8233_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AVV35242
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All DBs
Position
4313984..4315321
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AA seq
445 aa
AA seq
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MPSFASAARSDSSGVAPYFPPMISRTVSFSVFLFGLLSLVMPSGYSLGPALLVLISGYCL
LREPRRLLRAAHKEDLAVIGVVAGLAALLLVSILLQGDAWQTTGVPIRLLLAVPVLVLVL
SCPPSLGAMWGGLILGSVLTGSWAMWQKLVWGVHRAGGFTNTINFGDICMLMGLMCLAGL
GWAMSQAGARRRYWLLALLIGGAFGIIGSLMSGTRGGWIGFPFAAWVLYRSYGEVISRRV
LRLGVFMCAGVIALMVMTPATGIQQRVEAGVSDVTKYMEDRNARTSAGARLEMWRGAFIM
IVDQPWLGRGETGYAEARDALVERGNLSHYVQPYEHPHNEFLDAWVKRGVLGLLALLALY
LVPLRHFYRRLDSDDLILRSLAVAGVLLPLTFLDFGMTWVMFSQASGVMVYAYWLAIIWG
TLRAHERRLEAASPAACDKAQAKHG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcattcgcttctgctgcgcgctcggattcatccggtgttgctccgtattttccc
cctatgatatcgcgcaccgtttccttcagtgttttcctgttcggcttgcttagcctggtg
atgccttctggctatagcctcgggccggcgttgctggtgttgatcagtggctattgtctg
ctgcgcgagccgcgcaggctgttgagggccgcccacaaggaagacctggcagtgatcggc
gtggtggcaggcctcgcggccctgttgctggtaagtatcttgctgcagggggatgcgtgg
cagacgacaggcgtgccgattcgtctgttgttggctgtgccggtgctggtgctggtgttg
tcgtgcccaccctcgctcggggccatgtggggcgggttgatcctcggtagtgtgctgacc
ggcagttgggcgatgtggcagaagctggtgtggggtgtgcatcgtgcgggtggcttcacc
aataccatcaacttcggcgatatctgcatgttgatggggctgatgtgtctggcaggcctt
ggctgggcgatgagtcaggcgggagctcggcggcgctattggttgctggcgcttctgatc
ggcggcgcgttcggtatcattggctccttgatgtcggggacgcgcggcggttggatcggc
ttcccgtttgccgcctgggtgctgtatcgcagttatggtgaggtgatctcgcggcgcgtg
ctgcggttgggcgtcttcatgtgtgccggggtgatcgctctgatggtgatgacgccggcc
accggtatccagcaacgtgtcgaagccggcgtctcggatgtcacgaagtacatggaagat
cgcaatgctaggacctcggcgggcgcgcgcctcgagatgtggcggggcgcctttatcatg
attgtcgaccagccgtggctgggcaggggcgagacaggatatgccgaggcgcgtgatgcg
ttggtcgagcgggggaatttgagccactatgtgcagccgtatgagcatccccataacgag
tttctcgatgcgtgggtcaagcgcggggtgttggggctgcttgcgttgctggccctctat
ctggtgccgctgcgccacttctatcgtcgcctggacagtgacgacctgatattgcgttca
ctggctgtcgccggggtactgctgccgctgaccttcctcgatttcgggatgacctgggtg
atgttctcccaggccagcggcgtcatggtctacgcctactggttagcgatcatctggggc
acgctgcgcgcccatgagcgccgccttgaggcagcgtcgcctgccgcttgcgataaggcc
caagccaagcatggctga
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