Halomonas sp. FeN2: KF947_02850
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Entry
KF947_02850 CDS
T10697
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hafn Halomonas sp. FeN2
Pathway
hafn00071
Fatty acid degradation
hafn00280
Valine, leucine and isoleucine degradation
hafn00310
Lysine degradation
hafn00362
Benzoate degradation
hafn00380
Tryptophan metabolism
hafn00410
beta-Alanine metabolism
hafn00640
Propanoate metabolism
hafn00650
Butanoate metabolism
hafn00907
Pinene, camphor and geraniol degradation
hafn00930
Caprolactam degradation
hafn01100
Metabolic pathways
hafn01110
Biosynthesis of secondary metabolites
hafn01120
Microbial metabolism in diverse environments
hafn01200
Carbon metabolism
hafn01212
Fatty acid metabolism
Module
hafn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KF947_02850 (fadB)
00650 Butanoate metabolism
KF947_02850 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KF947_02850 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KF947_02850 (fadB)
00310 Lysine degradation
KF947_02850 (fadB)
00380 Tryptophan metabolism
KF947_02850 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KF947_02850 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KF947_02850 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KF947_02850 (fadB)
00930 Caprolactam degradation
KF947_02850 (fadB)
Enzymes [BR:
hafn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KF947_02850 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KF947_02850 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KF947_02850 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KF947_02850 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UBR51985
LinkDB
All DBs
Position
complement(593820..596006)
Genome browser
AA seq
728 aa
AA seq
DB search
MIYQGNAITVTRRDTPSGNNIAMLTFDLKDESVNKLSSAVVAELSEAVKAIQAENSLKGL
LIASGKDVFIVGADITEFHTLFDKGEAYLEEMNLKVHDIFNAIEDLPFPTVTAINGLALG
GGCEVLLTTDFRVMGDKAKIGLPETKLGILPGWGGCVRLPRIIGADNAIEWIAGGTENRA
DAALKVGAVDAVVTAEQLEEAALDILDRANAGELDYQARRAEKTSPLKLNPIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGEERGRAQAIEAKAFAKLALSSVAFNLVGLFLN
DQVVKKKASKYEKQAQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFAKQVERKKLTTEQMSEKLTNIRPTLSYGDFGNVDLVVEAVVENPKVKDAVLTEVE
GMVSENTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQHVDKVMEKFGWPMG
PAYLLDVVGLDTAVHANEVMAEGFPDRMARDGKTAIQVMYDNDRLGQKNDKGFYAYEEDK
KGKPKKVTDEAAYALVKEVVKEHKEFSDEDIIARMMVPLCLETVRCLEDGIVATPAEADM
ALIYGIGFPPFRGGALRYIDAMGVAEFVKLAEGLADELGALYAPTDKLRQMAQNNEQFYS
SDNSATQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccattacggtgacacgtcgtgacaccccgagtggcaataat
atcgcaatgctcactttcgatctgaaagatgagtccgtcaacaagctttccagcgcggtg
gtcgcagagctgagcgaagcagtaaaagccattcaagctgaaaatagcttaaaaggttta
cttattgcgagcgggaaagatgtgtttatcgtgggcgccgatatcaccgagtttcacact
ctatttgataaaggcgaagcctaccttgaggagatgaatctcaaggttcacgatattttt
aacgctattgaagatctgccgttccctaccgtaacagcgatcaatggactggctctgggt
ggtggctgcgaagtactgctaaccaccgattttcgcgtgatgggcgacaaagccaagatc
ggcttgcccgaaaccaagctcggtatcctgcctggttggggtggctgcgtgcgtctaccg
cgcattatcggcgccgataatgccattgagtggattgccggtggtaccgaaaaccgtgcc
gatgccgcgctaaaagtgggtgccgtcgatgcggtggtgacggctgaacagttggaagag
gccgcactggatattcttgaccgtgcgaatgccggtgagctggattaccaggcccgccgt
gctgaaaagaccagccctctgaagctcaacccgattgagcagatgatggcgtttgaaacg
gcgaaaggctatgtcgctggaaaggcggggccacattatccggcgccggtagaagcgatc
aaagtgattcagaaaggcgctggcgaagagcgtggccgtgcccaggccattgaagctaaa
gccttcgccaagctggcgctcagcagcgtggcgtttaacttggtgggtctgttcttgaac
gaccaagtggtcaagaaaaaagccagcaagtatgagaaacaggcgcagccggttaagcaa
acggccgtgctgggtgcgggtatcatgggcggtggtatcgcttatcagagtgcctctaaa
ggcacgcccattctgatgaaagatatcaaggatgacgccattgagctgggcctgaaagaa
gcccgtaagctatttgccaagcaggtagagcgcaaaaagctgaccaccgagcagatgtcg
gaaaagctgaccaatattcgcccgacgctctcctacggagactttggcaacgtcgatctc
gttgtcgaagcggtggttgaaaaccccaaagtcaaagacgccgtactgaccgaagtggaa
gggatggtgagcgaaaataccattctcacctcgaacacatcgacgatttccatcaaccgc
ttggcgcaaaacctaaagcggccggaaaatttctgcggtatgcacttcttcaaccccgta
caccgcatgcctctggtagaagtcatccgtggtgagaagacctcggatgccgccgttgcc
gccaccgtggcttacgcaagggcaatgggtaaaacgccgattgtagttaacgactgcccg
ggcttcttggttaaccgggtactcttcccttactttggcggctttagcttcctggttgag
caaggcgctgacttccagcacgttgataaagtaatggagaagttcggctggcccatgggc
ccggcctacctgctggatgtggtcggtctggataccgccgttcacgccaatgaagtcatg
gcggaaggcttcccagatcggatggcccgcgacggtaaaaccgctattcaggtcatgtac
gacaacgaccgtttaggccagaagaacgacaagggcttttacgcctacgaagaagacaag
aagggtaagccgaagaaagtcactgacgaagcggcttacgctttagttaaagaggtggtg
aaagagcataaagagttttccgacgaggatattatcgctcgcatgatggtaccgctctgc
ttggaaaccgtgcgctgcctggaagatggcattgtggcaacgccagccgaagccgatatg
gcgttgatctatggtatcggtttcccgccgttccgtggtggtgcattgcgctacatcgac
gccatgggcgttgcagagttcgtcaagctggcggaagggctagccgacgagttgggggca
ctgtatgcgcccaccgacaagctgcgtcagatggctcagaacaacgagcaattctattcc
agtgacaactctgccacccaggcctaa
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