Halomonas sp. FeN2: KF947_03090 Help Entry KF947_03090       CDS       T10697                                  Symbol hrpA Name (GenBank) ATP-dependent RNA helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism hafn  Halomonas sp. FeN2 Brite Enzymes [BR:hafn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      KF947_03090 (hrpA) Messenger RNA biogenesis [BR:hafn03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      KF947_03090 (hrpA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-ProteinID:  UBR50509 LinkDB All DBs Position complement(648642..652649) Genome browser AA seq 1335 aa AA seqDB search MEADSIVTTDTSPAPTDSQRLASLKQAAGDVMLRDAERLERRLAGLNRRLGDNKPISRGL DEVEREFSRSQQQLSQRESQKVALNYPPELPVVERREDILNAIRDHQVVVVAGETGSGKT TQLPKMCLELGRGRRGLIGHTQPRRLAARSVAGRLAEELEVSMGEQVGYQVRFTDQSSPT TLVKLMTDGILLAETQHDPLLLRYDTIIIDEAHERSLNIDFLLGYLKRLLPKRPDLKVII TSATIDVERFAKHFGTAKTPAPVVEVTGRTYPVEVHYRPLVRDEDDEEDRTLQEGILHAV DEIEAIEREKGWLHGPRDVLVFLPGEREIRETADTLRRAELKGTEILPLYARLSNEEQNR VFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASAN QRKGRCGRIAEGVCIRLYSEEDFLSRSGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFV DPPDSRFVKDGFRLLFELGAVDEKQRLSPLGRKLARLPIDPRLARMVLAGVEFGSLRDVL IVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRR WCREHYINYLRMREWHDTFRQLRQLLRDMDIDVPAPPPRNEDESEEQARQTRRKTSGKVH QALLSGLLSNLGTLVENREYLGARNRKFMIHPGSGLAKKSPKWIMAFEMVETSKLFARTV AKIDPQWIEPQAQHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRKVHYGPIAPQE SRELFIRRALVEGEFQTKGAFFAHNRALIDEVVALEDRARRRDILVDEDTLYDFYDQRIP AEIVNGKGFEHWRKQAEQQEPQLLHFDIESLKARDAKDVTQAQYPDHLILAGVAYPVSYH FDPEAEDDGVTLTVPAAMLPQVPVHALEWLVPGLLREKCIALLKSLPKSIRRQVVPIPDW VDAALETLVPDQRPLTEALGEFIRRRTSTRVHPDDWRLDLLEPHLIMNIRVVDHAGEILG QGRDLRALEQRFEAAASAGAQALAEQVSHEPAVAGLPTTPLPASRVTTQAGIRVEAYPAL VAADANEFKVALFDHPAKADAAHQEGIARLAIAKLPEQVKAIKQLPGVEKCALLFAKVGS KQALIDDLLLAVFTQVVAQHPLPRSEGEFSQRLSATQSQLVDEAKALLVRVEAALKGHLA VSKVLKGKLNFALALVYSDVSAQMQRLVYPGFIRDAGAWLDEYPRYTEAALIRLEKAARE RGRDQMMMQDVQALEARFDARRESERRGRVEDPELVAFGWWLQELRVSLFAQQLGTSMVV SVKRLEKRWQEITSV NT seq 4008 nt NT seq  +upstreamnt  +downstreamnt atggaagccgactcaatcgtgaccaccgacacatccccagcccccaccgatagccaacgt cttgcgtcgctgaaacaggccgcgggcgatgtgatgctgcgcgatgcagagcggctggag cgacggctggccggtttaaaccgccgcctaggcgataacaaaccgattagtcgtggtttg gacgaagtggagcgtgagtttagccgttcccagcagcagcttagccagcgcgaaagccaa aaggtcgccctcaactacccgccagaattgccggtggtcgaacggcgggaagatattctc aacgccatccgcgaccatcaggtcgtggtggtggctggggagactggctcaggcaaaacc acccaactgcctaaaatgtgtttagaactgggccggggccgccgtggcttaattggccac acccaaccgcgtcgcttggctgcccgcagtgtcgccggtcgcctagcggaagaactagaa gtctctatgggcgagcaggtgggctatcaggtgcgcttcaccgaccagagcagcccgacg accctggtcaagctgatgaccgacgggatattgctggccgaaacccagcatgatccgctg ctgctgcgttacgacaccatcattattgatgaagcccacgagcgcagcctgaatatcgac tttctgctcggctacctcaagcgcttactacccaagcggcccgatctaaaagtcatcatt acctcggcgactatcgacgtggagcgctttgccaagcacttcggcacggccaaaacgccc gcgcctgtggtggaagtcaccgggcgcacctatcccgtagaagtgcactaccggccgctg gtgcgcgacgaggacgatgaggaagaccgaacgctgcaagagggcattctgcacgcggtg gacgagattgaagccattgagcgcgagaaaggttggttgcacggcccccgggatgtgctg gtgtttttacccggtgagcgcgaaattcgtgaaaccgccgatactctgcgccgcgccgag ctgaaaggcaccgaaatcctgcccctttacgcacggctctccaacgaagagcagaaccgc gtgtttgcgccgcaccgcggccggcgcattgtactcgccaccaacgtcgcggaaacgtcg ttgacggtgcctggaattcgctatgtgatcgaccccggcctcgtgcgtatcagccgctat agctaccgttccaagatccagcgactgccggtagaagcggttagccaggccagtgccaac cagcgtaaagggcgctgtgggcggattgccgaaggcgtgtgcattcgcctctatagcgaa gaggattttctctcccggtccggctttaccgaccccgaaatccagcgcaccaacctggcc tcggtgattctctcgatgctggggctcaagctcggcgatatcgaggcctttccgtttgtt gatccgccggatagccgctttgttaaagacggcttccgactgctgttcgagctgggcgcg gtggacgaaaaacagcgcctttctccgctcggacgtaagctggcgcggctgccgattgac ccacgcctggcgagaatggtgctagcgggtgtcgaattcggcagcctgcgagatgtactg atcgtcgtctcggcgctggccatccaagatccccgtgaccgaccagcggataagcgccaa gccgcggaccaagctcaccagcgctggcacgatccggattccgactttgtcgccttgctg aacctctggcacggcattgagaatgcccgtgaggcgctttcaggtaatcaactgcgccgc tggtgccgcgagcactacatcaactacctgcgcatgcgcgagtggcacgacaccttccgc caactgcgccaactgctgcgcgatatggatatcgacgtgcccgcgccgccgccccgtaat gaagacgagagcgaagaacaggcgcgtcaaacgcggcgtaaaacgtcgggcaaagtgcat caggcgctactctcggggctgctctctaatctggggacgttggtggagaaccgcgagtat ctcggcgcccgcaatcgcaagtttatgattcatcctggctcagggttggccaagaagtcg cccaagtggatcatggcgtttgagatggtggaaacctccaagctgtttgcccgcaccgtg gccaaaatcgatccccagtggattgaaccccaggcgcagcacctggttaaacgcagctac agcgaaccccattgggagatgaagcgcgcccaggtagtggcttttgaacaggtcacgctg tttggtctgccgattgtggcgcggcgcaaggtacattacgggccgatcgcgcctcaggaa tcccgggagctgtttattcgccgtgcgctggtggaaggggagtttcaaaccaagggtgcc ttctttgcccataaccgcgcgctgatcgatgaagttgtggcgctggaagatcgtgctagg cggcgggacattctagtcgatgaagacacgctctatgacttttacgaccagcggatcccg gcggagatcgtcaacggcaagggctttgagcactggcgcaagcaggccgagcagcaagag ccgcaattactccacttcgatattgagtcgctgaaggcgcgtgacgcgaaggacgtgacc caggcgcagtaccccgatcatttgattctggcgggcgtcgcgtatccagtcagttaccac tttgaccctgaagccgaggatgacggtgttaccctgactgttcccgccgccatgctgccc caggtgccggtgcatgccctggagtggctggtgcctgggctgctgcgtgaaaagtgtatt gcgctgctgaagtcactgccgaaaagcatccgccgccaggtggtgccgattcccgattgg gtggatgcggcgctggaaacactggtacccgatcagcgcccgttaactgaggcgttaggg gagtttattcgccgccggacatcgacgcgggtgcatcctgacgattggcgcctagacttg ctcgaaccgcatctgatcatgaatattcgcgtggtcgatcatgcgggcgaaatcctaggg caggggcgcgatctgcgtgcccttgagcagcgctttgaagcggcagccagcgcaggcgcc caggccctggctgaacaggttagccatgagcccgctgtggccgggctgcccacgacaccg ctgccagcttcgcgtgttaccacccaggcaggtattcgcgtagaggcgtatcctgcattg gttgcagctgacgccaacgagttcaaggtagcgctgtttgatcacccggcaaaagctgat gccgctcaccaagagggcattgcccggctggcgattgccaagcttcccgaacaggttaaa gcgattaagcaactgccgggtgttgagaagtgcgcgctgctgtttgccaaagtgggcagt aagcaagctttgattgatgacctgctgctagctgtgtttactcaggtagtggctcagcac cccctgccacgctcggaaggggagtttagccagcgcctaagcgctactcagagccaactt gtggacgaagcgaaagcgctgttggtacgggtagaggctgcgctaaaaggccacctggcg gttagtaaggtgctcaaagggaaacttaattttgcgctggcgctggtatatagcgatgtt agcgcgcagatgcagcgactggtttacccaggctttatccgcgatgcgggcgcctggctt gacgaatacccacgctacaccgaggcggcgctcattcggcttgaaaaagccgcccgtgag cgcggtcgcgatcaaatgatgatgcaagacgtccaggcattagaggctcgctttgatgcc cgccgggaaagtgagcgacgcggaagggtggaagaccctgagttggttgcttttggctgg tggttgcaagagcttagagtgtcgctattcgcgcagcagttggggacgagcatggtggtg tcggtaaaacgactggaaaaacgctggcaagagatcactagcgtttag

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