KEGG   Halomonas sp. FeN2: KF947_07070
Entry
KF947_07070       CDS       T10697                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
hafn  Halomonas sp. FeN2
Pathway
hafn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hafn00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KF947_07070 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hafn02044]
    KF947_07070 (tssM)
Secretion system [BR:hafn02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KF947_07070 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1 HpsJ
Other DBs
NCBI-ProteinID: UBR51238
LinkDB
Position
complement(1517040..1520690)
AA seq 1216 aa
MWGTLKSRLSRWVPGFSRAQSTHNRAKAQANRVKGLGRLSMAMWGVLIVLLLVAIWWLGP
SWEVRDSYPLGPWVNRLLATLALVTLVAVIWGVRLSRRLREADELAQDMESQQADPIQES
IDQQETSLNSVLSEIIDSVGSGDSSRYRLPWYLVMGVENAGKTSLVNRSGQNFALSNVMK
ASGISSKKNRFGFDWWIGDKAILIDPDGELLTQGALETGEPDELNSRLWDHFTEWLERNR
PRRPLDGVVLVLDLARLSHAQVAVRKAYATLLRSRLRELMERHGSRLPVYVTFSKMDLLH
GFDDFFRHYSRVARRAPLGFTFSAKSIDTPGQWEEEFAAAYDNMLERLNRAMPTMLAECR
DREERESVFRFVRQLAGLRDVLLGFLSEALSSDRFSTAAIVRGTYFTSVYQQGVPEDPFV
DAAARRYGMSESVQPAHRATRSALYFTEELFEKVIYPEAGLAGDNAKVARRRQRTRQACI
VGCMLVSAVMIGGWSHFYQKNATSLSTVEHRAETFLATHPEEFQSDDPTGYEMLAPLDRL
RDAMHTFEDYRTHTPFLADMGLYQGHIIGGQLENAYLAMLEYQFLPALMVGIMDDMNREE
EGSNAKLALLRILRMMSDASGRQPERVHDFMAQRWQSDFPQRGEIQDRLLAHLDYALQHS
DLESRVAAGNRRAEYAMAPLRGSLVAAIDDLSRLPMDERVYATMKADSSRRGDPLDLRRQ
VGSMFNTVFMARNDEPSYVQLPYLVTRGGFENHFLQQLDRATELALIDLWVLDQREDINF
SNADRQQLQDALRDYYVSDYRVSWRDALRNTQLVPLPDIHQAAVVADALVSAERPLDRLL
AAVEQNTRLYPELPEDDEEAREALQRSPRYQLAHDIEQQFTAINKLSNPQEGDPSSLEEI
KSAVTELRDYLLDIEEASDPGRAAFIGARDRLSLRGDDPIYRLQRIADSSPEPVAGMLKS
LADQSWQLIMASAISHLENIWIDEVVAPYQERLAGRYPLVPSASRDASLSDFEAFFAPEG
ILDNFYQDNLQPFIEGAPEQLVDTQGNSLLRENVFAAVSQAEQIRRAYFGPDGALDVEFS
LEPISLSPDKRRSVISADGQLIEYTHSASSRVSMIWPNTLRGGTDSRITMVPSQVNRSPR
SMTRDGAWAWFRLLEEANITSVNERELELRFNVDGGAMRYRLFTDSAPNPFTRSPAAGFQ
LPSALYAERGPYADET
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgtggggaacattgaaatcaaggctgagccgctgggtgcccggcttttcacgtgcacag
agcactcacaatcgcgccaaagcgcaagctaacagagtcaaggggttagggcggctttcc
atggccatgtggggcgtattaatcgtgctcctattagtggccatctggtggttagggcct
agctgggaagtgcgtgacagctacccattaggcccctgggtcaatcgtttactggccacc
ttggcgctagtaacgttagtggcggtgatttggggcgttcggctttcccgtcgactgcgc
gaagccgatgagctcgcgcaggatatggagtcgcagcaggcagaccccatccaggaaagt
atcgaccagcaggaaacctcgctgaacagcgtgctatccgaaattattgatagtgttggc
agtggggacagcagccgctatcgccttccctggtatttggtcatgggggtcgaaaacgcg
ggcaaaaccagcttggtcaatcgctcggggcaaaatttcgctctgtccaatgtcatgaaa
gcctctggcatcagcagcaagaaaaatcgctttggttttgactggtggattggcgataaa
gcgatactcatcgaccctgatggcgagttattgactcaaggcgcactggaaacgggcgag
cctgacgaactgaatagccgcctatgggatcacttcaccgagtggctagagcgtaaccgc
ccacgccgcccgctggacggcgttgtgctggtgttggatctagcccgtcttagccacgcc
caggtagccgttcgtaaagcgtacgcgacgctgttacgcagccgcctgcgcgagttgatg
gagcgccacggcagccgactaccggtttacgtcaccttcagtaaaatggatttgctgcac
ggttttgacgattttttccgccattactcccgtgttgcacggcgggcgccgttaggcttt
accttctcggctaaatccatcgatacaccgggacagtgggaagaagagttcgccgccgct
tacgacaacatgctggaacgccttaatcgcgcaatgcctaccatgctggcagagtgccgc
gaccgggaagaacgggaatcggtatttcgctttgtgcgccagctagcagggctgcgtgat
gtattgctcggcttcctcagcgaggcgctttccagcgaccgcttttccaccgcggcgatt
gtacgcggcacgtatttcacctcggtttatcagcagggggtgcctgaagatcctttcgtt
gatgcagcggcccgccgttatggcatgtccgaaagcgttcagcctgcgcaccgtgccacg
cgcagcgccctgtatttcactgaagaactgtttgagaaagtcatttatccagaagcgggg
ctggccggtgataacgcaaaagtcgcccgccgtcgccagcgcactcgccaggcgtgcatc
gtcggttgcatgttagtgagtgcggtaatgatcggtgggtggagtcatttctaccagaaa
aacgcgacctcgctttccaccgtcgagcaccgggcggaaactttcctggccacccatccc
gaagagtttcagagcgacgacccaacgggctacgaaatgctggcgccgttggatcgcctg
cgcgatgcgatgcacacctttgaagactaccgaacgcacacgccgttcctggctgatatg
gggctgtatcaaggccacattattggtggccagttagaaaacgcctacctcgccatgctg
gagtaccaattcctaccggcgttgatggtgggcatcatggatgacatgaatcgcgaagag
gagggcagtaacgccaagctggcgctgctgcgcattttgcgcatgatgtctgacgccagc
ggccgccagcccgaacgcgtacacgactttatggcgcagcgttggcagtcggatttcccc
cagcgtggtgaaatccaagaccgcttactggctcatttagattacgccctgcagcacagc
gatttggaaagccgggttgccgctggtaatcggcgcgctgaatatgccatggcgccacta
cgcggcagcttagtcgccgcaattgacgacctatcacgcctgccgatggatgagcgggtc
tacgccaccatgaaagctgacagtagccgacgcggtgatcctctcgacctgcgccgtcag
gtggggtcgatgttcaacacggtgtttatggcgcgtaacgatgagccgtcttatgttcaa
ctgccgtatctggttacccggggaggctttgaaaatcacttcctgcaacagcttgatagg
gcaaccgagctagcgcttatcgacctgtgggtcttggatcagcgcgaagacatcaacttc
agcaacgctgaccggcagcaactgcaagacgccctgcgtgactattatgtcagtgattat
cgcgtgagttggcgtgatgccctgcgcaacacccagcttgtgcccctgccggatattcac
caggcagcggtggtcgccgatgcgctggtcagcgcagagcgcccgttagaccgtctgtta
gcagcggtcgagcagaatacccgtctctatcccgaactgcctgaagatgacgaggaagca
cgtgaagcgctacagcgctcaccgcgctatcagcttgctcacgatatcgagcagcagttt
accgcgattaacaagctctccaatcctcaagagggggatccctcctcgttggaggagatc
aaatcggcggtgacggagttgcgcgattacctgctcgatatagaagaggccagcgaccca
gggcgtgctgctttcatcggtgcgcgtgaccgcttatcgctgcgcggcgatgatcccatt
tatcgcctgcaacgtatcgctgacagctctcccgagccggtggcgggcatgctgaaaagc
ctggcggatcaaagctggcagctcatcatggcaagcgctatcagtcacctggaaaatatc
tggatagatgaggtagtggcgccctatcaagagcgtttagccgggcgctatccgctggtg
cccagtgcaagccgggatgcttcgctaagcgactttgaagccttctttgcccctgaaggc
atcctcgacaacttctatcaggataacttgcagccctttatcgaaggtgcgcctgagcaa
ctggtggatacccagggcaattcgctactgcgtgaaaacgtgtttgccgccgtgtcacag
gcggaacaaattcgccgtgcctactttggccctgatggtgcgctagacgtcgagttctct
cttgagccgatcagcttaagccccgacaagcggcgcagtgtgatcagcgccgatggccag
ctcatcgagtacacccatagtgccagcagccgggtatcgatgatttggcctaatacgctg
cgtggcggcactgatagccgcattaccatggtgcccagccaggtaaaccgctcgccgcgg
agtatgacccgcgatggcgcctgggcctggttccggctgttggaagaggccaacatcacc
agcgttaatgagcgtgagttagagctacgtttcaacgttgacgggggcgctatgcgttat
cgcctatttaccgatagcgcccccaatccctttacccgttcgcccgccgcaggcttccag
ctaccgtcagcactctatgcagaacgaggcccctatgctgacgaaacttaa

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