Halomonas sp. FeN2: KF947_07085
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Entry
KF947_07085 CDS
T10697
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
hafn Halomonas sp. FeN2
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hafn03000
]
KF947_07085
Transcription factors [BR:
hafn03000
]
Prokaryotic type
Helix-turn-helix
Other families
KF947_07085
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
AAA
Mg_chelatase
AAA_16
AAA_7
MCM
Torsin
TsaE
TIP49
Motif
Other DBs
NCBI-ProteinID:
UBR51241
LinkDB
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Position
complement(1522886..1524469)
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AA seq
527 aa
AA seq
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MQVKALDQRSASDAQPLAGLAAMPMALALVESTTPRELRLRSRQLLGNSLGLAWVECLYL
DSSGRWVGRDNSEARFNCDEFSHPYAHAIRTGKPVTLGVGEARTRLDHPGFQAQIASLSG
DLRLHVRPLRLQDSSREWLGVLAFVTEAATLTNLMECSGFVAFEALLCRLWSRLASSQGE
RQKSAVLRDSLAKLNDNTRRQGLAAKLASDLLGNSIAMQELRQQVIRAAETNLAVLLQGE
TGTGKDLVARAIHRFSSRAKAPFMAINCAAIPESLLESELFGHSKGAFSGADQARAGLIA
QADGGTLFLDEIGDMPLALQAKLLRVLESGRYRPLGSNEERCADLRLIAATHQPLREQIK
QQRFRADLYYRLGQFPLSLPSLSARREDIAFLAEHFVADFCAREERSEMGITPAALRQLK
ERDYPGNVRELKNLIDYACAMTPAGGDIEALLLPSDTASGADSATPETSGTLSKIHDLRQ
AVRDYEAQLISQRLLYYGGNRALAAESLGIPKRTLSHKCQLLELDAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaaaggctcttgaccagcgctccgctagcgatgcacagcctttagccgggctg
gcggctatgcccatggcgcttgcgctggttgaaagtaccactccacgggagctgcgttta
cgcagccgccaactgctgggtaatagcctgggtctggcgtgggtagagtgcctctatctg
gacagcagcggtcgctgggtgggccgtgataatagtgaggcgcgcttcaactgtgatgag
tttagtcacccctacgcccatgccatccgcaccggtaaaccggtgacactgggcgtgggg
gaggcgcgtacccggcttgatcatcccggttttcaagcccaaatagcctcccttagcggt
gatttgcggctacacgtgaggccgttacgactccaggacagttcccgtgagtggctaggc
gtgctggccttcgtaacggaagcggcaaccttgacgaacctcatggagtgcagcggtttt
gtcgcttttgaggccctgctgtgccggttgtggtcgcgcctggcaagtagccagggagag
cgccagaaatcagcggtattgcgtgactcgttagccaagctcaacgacaacacccggcgc
caggggttagcggccaagctggcgagtgatttgctgggtaactccatcgccatgcaagag
cttcggcagcaggtgattcgtgcggccgaaaccaatttagcggtgctactccagggtgaa
accggcactggtaaagatctcgtggcgagagcgatccaccgtttctcgtcacgcgccaag
gcgccgttcatggcgattaactgtgccgcgattcctgagtcgctgctggagtcggagctg
ttcggccattctaaaggggcgttttcaggcgctgaccaggccagggcagggctcatcgcc
caagccgacggcggtacgctgtttctggatgaaatcggcgatatgccgctagcgctgcaa
gccaaactgctcagggtgctggagagcggccgctatcggcccctagggtcgaacgaagaa
cgctgtgcagacctgcgtctgatagcggctacccaccagccgctacgcgagcagatcaaa
cagcagcggtttcgcgctgacctctactatcgcttaggccaattcccgctttcgctgcct
tcgctgtcggcacggcgtgaagacatcgcctttctggccgagcactttgttgctgatttc
tgtgcccgggaagaacgcagtgagatgggcatcacacctgccgcgttgcgacagctaaaa
gagcgtgattaccccggcaacgtgcgcgagctcaaaaacttgatcgattatgcctgcgcc
atgacccctgccggtggcgatattgaagccttgctcctgcccagcgataccgccagtggg
gctgattcagcgacaccagaaaccagcggcacgctgagtaagatccatgatctgcgccaa
gcggttcgtgattatgaagcgcaattgattagccagcgattgctttactacggcgggaat
cgtgcccttgcagcagagagcctgggaatacccaagcgaacgctctcccataaatgccaa
ttgctagaactggatgctaaatga
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