Halomonas sp. FeN2: KF947_12340
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Entry
KF947_12340 CDS
T10697
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hafn Halomonas sp. FeN2
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hafn03400
]
KF947_12340 (phrB)
Enzymes [BR:
hafn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KF947_12340 (phrB)
DNA repair and recombination proteins [BR:
hafn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KF947_12340 (phrB)
Prokaryotic type
KF947_12340 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UBR48158
LinkDB
All DBs
Position
complement(2691115..2692527)
Genome browser
AA seq
470 aa
AA seq
DB search
MKRQLIWLRSDLRIDDNSALAAAAAKGPVIAVFLRSIPQWQAHGHGANKLDFWARGVAAV
KTALNGLNIPLLHRDIERYDQTPEALLEIARQYDVEQLHFNHEYALNERRRDQAVQDAFK
QAGITAHGYHDGVAFAPGSLLTGKGDYYGVFTPFAKAWHKQVSADQLALRATPQVQAALN
IKSDPLPALPELASAPVDGRLWPAGENAAADNLARFLRFRGRHYNAQRDLPKVRGTSELS
PYLALGMISYRQCLQAVMSENGGHLADGDIGLTTWVNELIWREFYQHVAVGFPQVCRYQP
FQEHTKQLAWRDDDKGFQAWCEGRTGYPIVDAAMRQLVTTGWMHNRLRMITAMFLSKHLL
IDWRRGEGFFMRHLVDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDAEGEFIA
HWLPELAKLPAKARHAPQQDLLTDVDYPAPIVDHKAARQRALEAFKSLSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcagttgatttggctgcgcagcgacctgcgtattgacgacaacagcgccctc
gccgccgccgcggctaagggccctgtgatagcggtgtttttgcgcagcattcctcagtgg
caagcacatggtcacggcgctaataagctggatttttgggcgcgcggcgtcgctgccgtc
aaaacagcgctcaacggtttgaatattccgctactgcatcgcgatattgaacgctatgac
cagacgcccgaggcactgcttgagatcgctcgccaatatgatgttgagcagttgcacttc
aatcacgaatacgccctcaatgagcgccgccgcgaccaggctgtgcaggacgcctttaaa
caggccgggattaccgcccatggctaccatgatggcgtggcttttgcccccggcagcctg
ctaaccggcaaaggcgactactacggggtatttacgccgttcgccaaggcgtggcacaag
caggtcagcgccgaccagttagcgctgcgcgcgacgccacaggtacaagcagcgctgaat
attaaaagcgacccgctgcctgccctgcccgaacttgcaagcgcccctgtcgatgggcgg
ctatggcctgccggagagaacgccgcggcagataacctggcacgctttttacgctttcgt
ggccgtcactataacgcccagcgcgacctgccgaaggtacgtggcaccagcgaactatcg
ccctatctggcgttaggcatgatctcctatcgccaatgtctacaagcggtgatgagcgaa
aacggcggtcacctggccgatggcgatatcggccttaccacctgggtcaacgaactgatc
tggcgggagttttatcagcacgttgcggtaggctttccccaggtgtgtcgctaccaaccc
ttccaggaacacaccaagcagttagcctggcgcgacgatgataaaggctttcaagcctgg
tgtgaggggcgaacgggctaccctatcgtggatgctgccatgcgccagttagtgacgacc
ggctggatgcacaaccggctgcgtatgattacggcgatgtttttaagcaagcacctgcta
attgattggcgacgcggtgaaggcttttttatgcgccacttggttgacggtgaattctgc
gccaataacggcggctggcagtgggcagcctcaacaggcaccgatgccgctccttacttt
cgcatttttaaccccaccacccagtccacacgctttgacgctgaaggcgagtttatcgcc
cactggctgcctgagctggccaaattacccgccaaagcgcgccacgcgccgcagcaagat
ctactcaccgatgtcgactacccagcgcctattgtcgaccacaaagcagcacgtcagcgc
gccttagaggcgtttaagtcgctctctaaataa
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