Halomonas sp. FeN2: KF947_12360
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Entry
KF947_12360 CDS
T10697
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hafn Halomonas sp. FeN2
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hafn03021
]
KF947_12360 (rapA)
Transcription machinery [BR:
hafn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KF947_12360 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
ResIII
SNF2-rel_dom
DEAD
YGR130C_N
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
UBR48162
LinkDB
All DBs
Position
complement(2696177..2699122)
Genome browser
AA seq
981 aa
AA seq
DB search
MSDFSPGQRWISDGEAELGLGTVLNCDARSVTILFSASQETRTYNTRQAPLTRVMFGSGD
RVLSADGWQIVVDDSKESNGLITYIGEDKEGNLRELPEAKLADTMQFDQARDRLLTGQVD
RNDWFDLRFRTLHHYQRIEQHSALGFSGPRIDLIPHQLYIANEVANRHAPRVLLADEVGL
GKTIEAGLILHRLLLNGRVERALILVPDSLTHQWLVELLRRFSLNVTLLDETQSQAHGSY
NPFESAQLVLASQGWLFANPQRQEQALASQFDLLIVDEAHHLDWSEEGSGPGYRCVEQLS
AVIPGLLLLTATPEQMGIKSHFARLRLLDSERYHDLERFKAEESHYTEVARAIDALETLP
DDPSARTDVSAVADDRDSQALLAILCNPEASKEQQDAARAQLSEALLDRHGTGRVMFRNS
RRHVGGFPERRLNLVPLALPSAYRRVVRRLERDDDYLDELLIETGMDHPDVLIYPDAAYR
ELSNDPLNGEDWWHIDPRVNWLLEKLSDDSENGFANEKVLVIAHHRETAEGLAEGLRVLG
GYHAPVFHEDLSLIERDRAAAAFADEDEGVQVLVCSEIGSEGRNFQFCRHLVMFDMPQHP
DQLEQRIGRLDRIGQRHAIELHIPTFEGSPGERLLRWYHEGMDAFSAPHGVGNELFDAFG
DALADALLDDEALDEIIAETRAMFSAKLAEHDAGRNRLLELNACRPARAQQVIDAVRELD
DDAALPRYIERALDIFGVDSQEIGKGLMHLQPSQHMLDGLPGLVKGEEGFTATYSRAQAL
ARDDVQRLSWEHPLLREMMGRVLDGTMGNSALALLRHDAIPSGRLMAELVFRTHCPAPKK
LHLNRFLPPTAVRLLLDESGANLTSKISFTGLGKNLQKVNKSLARDLIKSRHDQLRELLT
QGEGEAERQLPSIVENAEARMRAQLDAEIARLTALAEHNPAVRSAEIDALKDERKALSEA
IENTRLRLDSVRVIITVDADR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttttctcccggccaacgctggattagcgacggcgaagctgagcttgggctc
ggcaccgtgcttaactgcgacgcccgtagcgttaccattttgttcagtgccagtcaggaa
acccgtacctacaacacccgccaggccccgctcacccgcgttatgttcggcagcggcgac
cgcgtactctccgctgacggctggcagatcgttgtcgatgacagcaaagagtccaacggc
ctgatcacctatatcggtgaagataaagaaggcaatctgcgcgagctgcccgaggccaaa
ctcgccgataccatgcagttcgaccaggcccgcgaccgcctgctgaccggccaggtggat
cgcaacgactggtttgatttacgttttcgcaccctgcaccactatcagcgtatcgagcaa
cacagcgcgctgggcttttccgggccgcgcatagacctgattcctcaccagctctacatt
gccaatgaagtcgccaaccgccatgcgccccgggttctgctggcggatgaggtgggccta
ggtaaaaccattgaagccgggctgattctgcaccgcctgctgctcaacggccgcgttgag
cgggcgctgattctggtgcccgacagcctcacccaccagtggctggtcgagctgctgcgg
cgcttctcgcttaacgtcacgctgctggatgaaacccaaagccaggcccacggcagttac
aacccctttgagagcgcccagctggtgttagccagccagggctggctatttgccaacccg
caacgccaggagcaggcgctggccagtcagttcgatctactgatcgttgacgaagcgcat
caccttgactggagtgaagagggcagcggccccggctaccggtgcgtcgaacaactttcg
gcggtgattcccggcctgctgctgctcaccgccacccccgagcagatgggcatcaagagc
cactttgcccgcctgcggttgctggacagcgagcgctaccacgatcttgagcgcttcaaa
gccgaagagagccactacaccgaagtggcccgcgccatcgatgccttggagacactgcct
gacgaccctagcgcccgtaccgacgtctctgcagtagccgatgaccgcgacagccaggcg
ctgctagccatcctatgcaaccctgaggccagcaaagaacagcaggacgccgctcgcgcc
caactgagcgaagcgctgctggatcgccacggtaccggccgagtgatgttccgcaacagc
cgccgtcacgtagggggcttcccggagcgacgcctcaacctagtgcccttagcgctgcct
tcggcctaccgtcgcgtcgtgcgccgcttagagcgcgatgatgattacctcgacgaactg
ctgatcgagaccggcatggatcaccccgacgtgctgatctatcctgacgcggcctaccgc
gaactcagcaatgacccgctcaacggcgaagactggtggcacatcgatccgcgggttaac
tggctactggaaaagcttagcgacgacagtgagaacggcttcgccaacgagaaagtcctg
gtcattgcccaccaccgggaaaccgccgaagggcttgctgaagggctacgggtgctgggc
ggctaccacgcaccggtgttccacgaagacctctccctgatagagcgtgaccgcgcagcg
gcggcgtttgccgatgaggatgaaggcgttcaggtattggtctgctcagaaattggctcg
gaggggcgcaacttccagttctgccgccatctggtcatgttcgatatgccacagcatccg
gatcagctcgaacagcgcatcggccgcctggatcgcatcggtcagcgccacgccattgag
ctgcacattccgacttttgagggcagccccggcgagcgcctactgcgctggtaccacgaa
gggatggatgcgttcagcgccccccatggggtcggcaacgagctgtttgatgcctttggt
gacgccttggctgacgccctgctggatgatgaggcacttgacgagatcatcgccgaaacc
cgtgcgatgtttagcgccaagctggcggagcacgatgcaggccgtaaccgtctgcttgag
ctcaacgcctgccgccccgcccgcgctcagcaggtgatcgacgcggtgcgcgagcttgac
gatgacgccgccctgccgcgctatattgagcgagcgctggatattttcggcgtggatagc
caagagatcggcaaaggcttaatgcacctgcagcccagccaacatatgctggatggcctg
ccgggtctggttaaaggtgaagagggctttaccgccacctacagccgcgcccaggcgctg
gcccgcgacgatgtgcagcggctctcctgggagcacccattgctgagggaaatgatgggc
cgtgtactggatggcaccatgggcaactcggcgctcgctctgctgcgccacgatgccatt
cccagcggccgcttgatggctgaactcgtgttccgcacccactgcccggcgcccaagaag
ctgcaccttaaccgcttcttgccgcccaccgcagtacgcttactgctggatgaatcaggc
gccaatctgaccagcaaaatctctttcaccggcttgggcaaaaacctgcagaaggttaac
aagtcgctggcacgggatttgatcaagagccgtcacgaccaattgcgtgaactgcttacc
cagggtgaaggcgaagccgagcgccagctgcccagcatcgtcgagaacgctgaagcgcgc
atgcgcgcccagctggacgccgagattgcgcgcttaacggcacttgccgagcacaatccg
gcggtgcgcagtgctgaaatcgacgcgttaaaagatgagcgcaaggcgcttagtgaagcg
attgagaacacccgcctgcggcttgactcagtacgggtgattatcaccgttgatgctgac
cgctag
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integrated database retrieval system
