Halomonas sp. FeN2: KF947_14225
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Entry
KF947_14225 CDS
T10697
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hafn Halomonas sp. FeN2
Pathway
hafn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KF947_14225 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hafn03400
]
KF947_14225 (mutM)
Enzymes [BR:
hafn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KF947_14225 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KF947_14225 (mutM)
DNA repair and recombination proteins [BR:
hafn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KF947_14225 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UBR48501
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Position
3077250..3078092
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AA seq
280 aa
AA seq
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MPELPEVETTRRGIAPYIEGQEVTEVLVRQPRLRVPVPDDLAERLVGARIGVLMRRAKYL
QIPIQVGGALEGDASATLLWHLGMSGSLRIARVGDLPKKHDHVDVVTASGYVLRYHDPRR
FGFVDWQATDAAQDKRLAHLGPEPLSDAFNGKWLYTLSRNKRVAVKPFLMDNQVVVGAGN
IYAAEALFMAGIDPRRAAGRVSRARYDALALAVKEVLAAAITQGGTTLRDFVSGQGEPGY
FAQRLNVYGRHGQPCLRCGAELRRITLGQRASVFCPGCQR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcctgaagttgaaaccacccggcgcgggattgctccctatattgaaggt
caggaagtcaccgaagtgctggttcgtcagccgcggctgcgtgtgcccgtgcccgatgat
ctggccgagcggctggtcggtgcgcgcattggagtgttgatgcggcgggcaaaatacctg
cagattcctatccaggtgggtggcgcgcttgaaggagacgctagcgcgacgctgctatgg
catttgggtatgtcgggcagtctgcggattgcccgggtgggggacttgcctaaaaagcat
gaccacgtggacgtcgtgactgccagcggctacgtgctgcgctatcatgatccccgtcgg
tttggctttgtggattggcaggccacagacgcagcgcaggataagcggcttgctcacttg
ggcccggagcccctgtctgatgcgtttaacggcaaatggctctacacgctttcgcgtaac
aagcgcgtggcggtaaagccgtttctgatggataaccaagtggtggttggtgctggcaat
atctatgcggctgaagcgctctttatggccggtattgatccgcgccgtgcggcgggaaga
gtttcccgtgctcgctatgacgccttggccctggccgtgaaagaagtgctggcggcggca
attacccagggcggcaccacgctgcgggattttgtcagtggccagggggagcccggctac
tttgcccagcgccttaatgtttatggtcgccacggtcagccttgtttgcgctgtggcgct
gagcttaggcgcattacgcttggccagcgtgctagtgtgttctgccccggctgtcagcgc
taa
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