Halomonas sp. FeN2: KF947_14370
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Entry
KF947_14370 CDS
T10697
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hafn Halomonas sp. FeN2
Pathway
hafn03030
DNA replication
hafn03430
Mismatch repair
hafn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KF947_14370 (dnaE)
03430 Mismatch repair
KF947_14370 (dnaE)
03440 Homologous recombination
KF947_14370 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hafn03032
]
KF947_14370 (dnaE)
03400 DNA repair and recombination proteins [BR:
hafn03400
]
KF947_14370 (dnaE)
Enzymes [BR:
hafn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KF947_14370 (dnaE)
DNA replication proteins [BR:
hafn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KF947_14370 (dnaE)
DNA repair and recombination proteins [BR:
hafn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KF947_14370 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Herpes_IR6
Motif
Other DBs
NCBI-ProteinID:
UBR48527
LinkDB
All DBs
Position
3105798..3109310
Genome browser
AA seq
1170 aa
AA seq
DB search
MTVPFVHLRLHSEYSLVDGLVKLKSLVSTTAERAMPALALTDETNLFGLVKFYKAAQGAG
LKPIIGSDLWLQNPHDESHPYRLTLLAMNDVGYRNLTELISKGWTHGQRQGRAILDKQWV
LEQSEGLIALSGAREGEIGRHLLSDHEQDARVLLEEWQAAFPERFYLELIRTGRPLEEAC
VHASVKLAIETGTPVVATNDVRFLEREDYWAHETRVAIGEGKALDDPRRERRYTEEQYLK
SPDEMAALFADIPEALENSVMIAERCSVDVRLGEIFLPEFGIPEGMTQDEFFRKVSHDGL
TERLDFLFPAERYPRDSEEYQAIDQRYRDRLEFELNVIIQMGFPGYFLIVMDFIQWAKDN
SVPVGPGRGSGAGSLVAYAQKITDLDPIGYDLLFERFLNPERVSMPDFDVDFCMEKRDKV
IEYVAERYGRNAVSQIVTFGTMAAKAVVRDVARAQGRPYSLGDKLSKLIPFEVGMTLSKA
IEQEPALKEFIGNDEEAEEIWEMALKLEGTTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEEAGLVKFDFLGLRTLTIIDWALEMVDKVRSVNGQDPLNIDSIPLDDA
PTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINR
KHGRAEVSYPHPDYQHELLKPVLAPTYGIILYQEQVMQIAQVMAGYSLGQADMLRRAMGK
KKPEEMAKQRDGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLRLTVTPPNVNVGGYKFTVDTDARVVYG
LGAIRGVGEGPIGAIVEAREADGPFKDIFDFCRRIDPKRMNKRTLEALIRSGALDTLGPN
RAVLFAAMEDALKAAAQNHANQNLGMLDMFGDAFAAADESDGDSNVYAEYINAREWTDRE
RLSGEKDTLGLYLTGHPIDEYERELKRFVSTRISDLKPSRDPQRVAGLVVGVRTMKSKRG
DTMAFITLDDRTGRIEASLFGELFEQLRGQIEADQVLIVEGEVSSDEYSGGLRLRGKDVT
PMVTARIRYGQAVELALDAGQINGRLIETLRDSLTPYRDQEGLPVRLQYRHPAAVAWLEL
ADEWKVAPSDDLLLALQDVQGQTGVQLRYR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacggttccgttcgttcatttacgtttgcacagtgaatactccctggtcgatggctta
gtgaagctaaagtcgctggtcagcaccacggctgaacgggcgatgccagcgctggccttg
accgatgaaaccaacctgttcggcctggtgaagttctacaaagccgcccaaggcgcgggg
ctgaagccgattattggcagcgacttgtggctccagaatccccatgacgagtcccaccct
taccggctaacgctgctggcgatgaacgatgtgggctatcgcaacctgactgagttgatc
tcgaaaggttggacgcatggtcaacgtcaggggcgcgccattctcgataaacagtgggtg
ctggagcagagcgaaggcttgattgcgctctccggcgcccgggagggcgagattggccgc
cacctgctatctgatcacgaacaggatgcccgggtgctgctcgaagagtggcaggcggca
tttcctgagcgcttttatctagagctgattcgcaccgggcgcccgctggaagaggcctgc
gttcacgccagcgtcaagctggccattgaaacaggcacgccagtggtggcgaccaatgac
gttcgttttcttgagcgcgaagattattgggcacatgaaacccgcgtcgccatcggtgaa
ggtaaagcgctggacgacccgcgccgggaacgccgctataccgaagagcagtacttaaaa
agccccgacgagatggcggcactgtttgccgatatccccgaagcgctggaaaacagcgtg
atgattgccgagcgctgcagcgtggatgtgcgcctgggcgagattttcctgcccgagttc
ggcattcccgaaggcatgacccaggatgagttcttccgcaaggtctcccatgatggttta
accgagcggttggattttctgtttcccgctgaacgctatcctcgtgacagcgaagagtac
caggcgatcgaccagcgctaccgcgaccggttggagttcgagctcaacgttattatccag
atgggcttcccaggctacttcctgatcgtgatggactttatccagtgggccaaggacaac
agcgtgccggtaggcccggggcgtggttccggtgctggttcgctggtggcctacgcgcaa
aagattaccgatctggatccgattggctacgacctgctgttcgagcgctttcttaaccct
gagcgtgtctccatgcccgactttgacgtcgacttctgcatggaaaaacgcgacaaggta
atcgagtacgtggccgagcgctacgggcgcaacgcggtttctcagattgtcacctttggc
accatggcggcgaaggccgtggtacgcgacgtggcccgtgctcaagggcgtccctactcg
ctgggggataagctctccaagctgattccctttgaagtgggcatgaccctgtccaaggcg
attgagcaggagcccgcgctcaaagagtttatcggcaacgatgaagaggccgaagagatt
tgggagatggcgctcaagcttgagggcaccacccggggcaccggcaagcacgccggtggc
gtggtcatcgcccccaccaaactgaccgatttctcaccgctgctctgcgatgaagatggc
tccggcttggtggtacagttcgataaaaacgatattgaagaggcggggctggtcaagttc
gactttctgggcctgcggacgctgacgattatcgactgggcgctggagatggtcgataag
gtgcgcagcgttaacggccaggatccgctcaacatcgacagcatcccgctggacgatgcg
cccaccttcgagatgctcaagcgcgccgaaaccacggcggtgttccagcttgagtcccgc
ggcatgaaggagctgatcaagcgcctgttgcccgactccctggacgacatgatcgccctg
gtggcactgttccgccccggcccactgcagtcgggcatggtcgacgactttatcaaccgt
aagcacggccgggctgaagtctcttatccacacccggattaccagcacgagctgttgaaa
cctgtcttggcgcccacctacggcatcattctctaccaagagcaggtcatgcagatcgcg
caggtcatggcaggctacagcctcggccaggccgatatgctgcgccgtgcgatgggtaag
aaaaagcctgaagagatggccaagcagcgcgatggctttatggagggctgtgccgccaac
ggtatcgataaagacctggccggtaatatctttgacctggtagagaaattcgccggttac
ggctttaacaagtcgcactcggctgcctacgcgctggtctcttaccaaaccgcgtggctg
aaagcccactatccggggccctttatggccgcggtgatgtccacggaaatggacaacctg
gataaagtggtaccgctgatcgaggagtgtcgcaacctccggctcaccgttacccccccg
aacgtcaacgttggtggctacaagttcaccgtcgataccgatgcacgtgtggtctacggg
ctaggcgccattcgcggcgtcggcgaaggccccattggcgccattgtcgaagcccgtgag
gcagatggccctttcaaagatatctttgatttctgtcgccgcattgatcccaaacggatg
aataaacgcaccctggaggcgctgattcgctccggtgcgctggatactttaggcccaaat
cgtgcggtactgttcgcagcgatggaggacgcactaaaagccgctgcccaaaaccacgcc
aatcagaatctgggcatgctggatatgtttggtgatgcgttcgccgcggccgatgaaagt
gacggtgacagcaacgtttacgccgaatacatcaacgcccgtgagtggactgatcgtgag
cggctctcaggggagaaagataccctggggctttacctgacggggcaccccatcgatgag
tacgaacgggagttaaagcgctttgtctccacgcggatcagcgatttaaagccttctcgc
gacccccagcgcgttgctgggttagtggtcggcgtgcgcaccatgaagtccaaacgtggt
gataccatggcgtttatcaccctggatgaccgcaccgggcgtattgaagcttcgctgttt
ggggagctattcgagcagttgcgcggtcagattgaggctgatcaggtactcatcgttgag
ggcgaggtctccagcgacgaatactctggtggcctgcgcctacgcggtaaagatgttaca
ccgatggtgacggcgcgcattcgctacggccaagccgtggaactggcactggacgcgggg
cagatcaatggccgcttaattgaaaccctgcgcgacagcctgacgccgtatcgcgatcaa
gagggtttgccggtgcgcctgcagtaccgtcacccagcggcagtggcttggctggaactc
gccgatgagtggaaagtcgcaccgagcgacgacttactgctggcgctgcaggatgttcag
ggccagacaggcgtacagctacgctatcgatag
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