Halomonas sp. FeN2: KF947_16940
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Entry
KF947_16940 CDS
T10697
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hafn Halomonas sp. FeN2
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hafn01002
]
KF947_16940
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hafn01011
]
KF947_16940
Peptidases and inhibitors [BR:
hafn01002
]
Cysteine peptidases
Family C82
KF947_16940
Peptidoglycan biosynthesis and degradation proteins [BR:
hafn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
KF947_16940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
GMC_oxred_C
Motif
Other DBs
NCBI-ProteinID:
UBR49013
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All DBs
Position
3704812..3706446
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AA seq
544 aa
AA seq
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MNEIQPLRQWAIGVALCLTLTHSPLGISHAYADSAPLQQALNQQVSAVEAHPLPIAEFYQ
LRDGQPAWQAVRAVESLVAALNSLETDGLTPEDYHADRLLDEFQRSQASSESAQAAFDIK
ATRSLLLALDHLERGKVNPRDVEPQWDAPRPERSYSLMRVVHAVDDYALDNAIALARPSS
AAYQQLRDALKQHYQLVNLGSVPYLDARDESLRPGDEDDDVSVLRQRLALWGEADLQVAD
SSAYPMIGVQAASNRRTFDAPLEAAVRRFQRRHLLQEDGVVGEQTRLALNTSVASRIDQL
RVNLERARWIRPMQSSEPRVWVDIAGYRMHYVRPNGQHWDARVVVGTPRRETPIIHSTIS
HLTINPSWTIPPTIMREDVLPQVRADIDYLARKNIQVISPMGEPLAAEEIDWQRPGGVML
RQVAGAGNPLGRVVVRFPNDDMIYLHDTPARGLFRRDQRALSSGCIRVEGVAELAQMLLQ
DTGSRYQMSSLLNGGSDRNVNLSQRIPIALHYLTAWPNAEGEVEFRPDIYRRDAALLAAL
QRSV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatacagccactaagacaatgggcgataggggtcgctctatgtctcacgctt
acccacagccctttaggcattagccatgcgtatgcggattcagcgccattgcaacaggcg
ctgaatcaacaagtaagcgcggtggaagcgcacccgttacccattgctgaattttaccaa
ctgcgcgacggtcagcccgcttggcaggcagtcagggcggtggaatcactggttgccgca
ctcaacagcttggaaaccgacggtttaacgcccgaggattaccatgctgacaggctgctt
gatgagtttcagcgcagtcaggcaagcagtgaatccgcccaggcggcgtttgatattaaa
gcgacgcggtcgctactgctggcgctggatcatctagagcgcggcaaggtgaacccgaga
gatgttgagccccagtgggatgcgccacgccctgaacgtagctactctctgatgcgcgtt
gtgcatgccgtcgatgattatgcgcttgataacgctatcgcgctggcccggccttcatca
gcggcatatcaacagttgcgcgacgctttgaagcagcattatcagctagttaacttgggg
agcgtgccctacctggacgcgcgggatgagtcgcttcggcctggggatgaagacgacgat
gtgagcgtgctgcgtcaacggttagcgctgtggggtgaggctgatttacaggtagctgac
agcagtgcttatcccatgattggggtacaggcggcgtctaatcggcgcacctttgacgca
ccgctggaagccgctgtgagacgttttcagcgccgtcatctgctgcaggaggatggtgtg
gtaggcgaacaaactcgcctggcgttgaatacctcggtggcgtcgcgaatcgatcagctg
cgggtcaatttagaacgcgcgcggtggatccgcccgatgcagtcttccgagccacgggta
tgggttgatattgcaggctaccggatgcactacgtgcgtcctaacggacagcactgggat
gcccgtgtagtggtaggaacgccgcgtcgtgagacgccgattatccattccacgatcagc
catttaaccattaatccttcctggacaatcccaccgacgattatgcgcgaggatgtattg
ccccaggtgcgtgccgatatcgactacttggcgcgtaaaaatatccaggtgattagtccc
atgggcgaaccgctcgctgcagaggagatcgactggcagcgccctggcggcgttatgttg
cgccaagtggcgggtgcgggtaatccgctaggtcgcgtcgtggtgcggtttcccaacgat
gacatgatctatttgcacgacacccctgcgcgtggcttgttccggcgcgatcagcgtgca
ctcagttcaggttgtattcgggttgaaggtgtggctgagctggcgcaaatgctgctgcaa
gataccggcagtcgttaccaaatgagttcgctgttaaatggggggagtgatcgtaatgtg
aacttatcccagcgtatacccattgcactgcattatttaaccgcgtggccgaatgcggaa
ggtgaagtggagtttaggcctgatatctaccgccgtgatgcagcgctactggccgcactg
cagcggtcagtttag
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