Halomonas sp. FeN2: KF947_19065
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Entry
KF947_19065 CDS
T10697
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hafn Halomonas sp. FeN2
Pathway
hafn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KF947_19065 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hafn03019
]
KF947_19065 (rppH)
Messenger RNA biogenesis [BR:
hafn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KF947_19065 (rppH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
UBR49405
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All DBs
Position
4171608..4172099
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AA seq
163 aa
AA seq
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MIDADGFRPNVGIIIANSQGQLLWARRVGQNAWQFPQGGINASETPQQALFRELYEEIGL
TADDVDIVACTRGWLRYRLPRRMIRTHSRPVCIGQKQKWFLLKIRCQESQICMTATPTPE
FDGWRWVSYWYPLGQVVPFKREVYRRALRELSPRVQRLAQDED
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctgacggctttcgccccaatgttggcatcatcattgccaatagccagggg
cagctgctttgggcgcgtcgggtaggacaaaatgcgtggcaatttccccaggggggcatc
aatgcaagcgagacgccacaacaagcactttttcgtgagctttacgaagagatcggccta
accgccgacgatgttgatattgttgcctgcacccggggctggctacgttaccgtctgcca
cgacgtatgattcgcacacattcgcgtccggtctgtataggccagaagcagaagtggttt
ttacttaaaatccgttgccaggaaagccagatctgtatgacggcaaccccaacgcccgag
tttgatgggtggcggtgggtaagctactggtacccgctagggcaggtcgtgcccttcaag
cgagaggtatatcggcgcgcgctacgagagttgtctccccgcgttcaacgcctggcacag
gatgaagattag
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