Halomonas sp. FeN2: KF947_19885
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Entry
KF947_19885 CDS
T10697
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
hafn Halomonas sp. FeN2
Brite
KEGG Orthology (KO) [BR:
hafn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hafn03019
]
KF947_19885 (rapZ)
Messenger RNA biogenesis [BR:
hafn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KF947_19885 (rapZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_23
SKI
AAA_21
Tp0624_N
FtsK_SpoIIIE
nSTAND_NTPase5
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UBR49555
LinkDB
All DBs
Position
complement(4350475..4351407)
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AA seq
310 aa
AA seq
DB search
MQLVIISGRSGSGKSIALQALEDLGYYAIDNLPAMLLGSLVDELRDQGDRTHLAVSIDAR
NLPGALERLPSLLEELRQRKIDFQVIYLTTDARILLERYSATRRRHPLTRDSEMTLEEAI
NKEEETLEDIRDLADLLIDTSRLSVHDLRRRITDQVAHQRRDKLTLTLESFGYKRGVPLD
ADLVFDVRCLPNPYWDPTLRQFTGRDAEIVAFLSSYPIVDAMSDDILAWLERWLPAYQNS
QRSYMTIAIGCTGGQHRSVYMVEKLAEKLAPSMGEVQLRHRELGLHYTLSEQLAAPLVSA
ATPNERPETS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtgatcattagcggccgctccgggtcaggtaaatctatcgccttgcaagcg
ctggaagatcttggctactacgcgattgacaacctccccgctatgctgctgggatcattg
gtggatgaactgcgtgaccagggcgatcgcacccatctggcggtcagtattgatgcccgc
aatttgccgggagcgctggagcgcctaccctctttgttagaggagttgcgtcagcgtaaa
atcgactttcaagtgatttacctaactaccgacgcacgcatactgcttgagcgctactct
gctactcggcgacgccatccgctgacccgcgatagcgagatgaccctggaagaggcgatc
aataaagaggaggaaacgctggaggatattcgcgacctggccgaccttttgatcgataca
tcacggttatcggtgcacgatttacgtcgccgtattaccgaccaggtagcgcatcaacgg
cgcgataagctgacgttaacgctggaatcgtttggctataaacgcggcgtaccgttagac
gccgacctggtcttcgatgtgcgctgcctgccaaacccttactgggatccaacgctgcgc
cagttcactggccgcgacgcggaaatcgtggcttttttgagcagctatccgatcgttgac
gccatgagcgacgacattttggcctggctggagcgttggttacccgcttaccaaaatagc
caacgtagctacatgactatcgccattggctgtacgggtggtcagcaccgctcggtctat
atggtcgagaagttagcggaaaaattagcgcctagcatgggcgaagttcagcttcgccac
cgcgaacttggcctgcattacaccttaagcgaacagttggccgctcctctcgtcagcgct
gccacacccaacgagcggccagagacctcttaa
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